NTDB

Overview

Name	med	Type	Regulator
Locus tag	P5622_RS18685	Genome accession	NZ_CP120598
Coordinates	3573175..3574128 (-)	Length	317 a.a.
NCBI ID	WP_003245494.1	Uniprot ID	A0AAE2SG99
Organism	Bacillus subtilis strain PRO115
Function	regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 3568175..3579128

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P5622_RS18655 (P5622_18655)	appD	3568295..3569281 (-)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-
P5622_RS18660 (P5622_18660)	yjaZ	3569473..3570258 (-)	786	WP_003232967.1	DUF2268 domain-containing protein	-
P5622_RS18665 (P5622_18665)	fabF	3570334..3571575 (-)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
P5622_RS18670 (P5622_18670)	fabH	3571597..3572535 (-)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
P5622_RS18675 (P5622_18675)	yjzB	3572700..3572939 (+)	240	WP_003232972.1	spore coat protein YjzB	-
P5622_RS18680 (P5622_18680)	comZ	3572969..3573160 (-)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
P5622_RS18685 (P5622_18685)	med	3573175..3574128 (-)	954	WP_003245494.1	transcriptional regulator Med	Regulator
P5622_RS18690 (P5622_18690)	-	3574219..3574776 (-)	558	WP_003232974.1	hypothetical protein	-
P5622_RS18695 (P5622_18695)	-	3574858..3575592 (-)	735	WP_003245223.1	hypothetical protein	-
P5622_RS18700 (P5622_18700)	yjzD	3575841..3576026 (+)	186	WP_003245236.1	DUF2929 domain-containing protein	-
P5622_RS18705 (P5622_18705)	yjzC	3576072..3576251 (-)	180	WP_003245356.1	YjzC family protein	-
P5622_RS18710 (P5622_18710)	argF	3576337..3577296 (-)	960	WP_003232980.1	ornithine carbamoyltransferase	-

Sequence

Protein

Download Length: 317 a.a. Molecular weight: 35310.80 Da Isoelectric Point: 4.5457

                                >NTDB_id=806467 P5622_RS18685 WP_003245494.1 3573175..3574128(-) (med) [Bacillus subtilis strain PRO115]

MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED

FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ

PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL

GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

Download Length: 954 bp

                                >NTDB_id=806467 P5622_RS18685 WP_003245494.1 3573175..3574128(-) (med) [Bacillus subtilis strain PRO115]

TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT

TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA

TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT

TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA

TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA

TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG

CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG

GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG

GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTG

GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG

CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC

AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
med	Bacillus subtilis subsp. subtilis str. 168	100	100	1

Detailed information NTG0806467