Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   P5622_RS18680 Genome accession   NZ_CP120598
Coordinates   3572969..3573160 (-) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain PRO115     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3567969..3578160
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5622_RS18655 (P5622_18655) appD 3568295..3569281 (-) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -
  P5622_RS18660 (P5622_18660) yjaZ 3569473..3570258 (-) 786 WP_003232967.1 DUF2268 domain-containing protein -
  P5622_RS18665 (P5622_18665) fabF 3570334..3571575 (-) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  P5622_RS18670 (P5622_18670) fabH 3571597..3572535 (-) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  P5622_RS18675 (P5622_18675) yjzB 3572700..3572939 (+) 240 WP_003232972.1 spore coat protein YjzB -
  P5622_RS18680 (P5622_18680) comZ 3572969..3573160 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  P5622_RS18685 (P5622_18685) med 3573175..3574128 (-) 954 WP_003245494.1 transcriptional regulator Med Regulator
  P5622_RS18690 (P5622_18690) - 3574219..3574776 (-) 558 WP_003232974.1 hypothetical protein -
  P5622_RS18695 (P5622_18695) - 3574858..3575592 (-) 735 WP_003245223.1 hypothetical protein -
  P5622_RS18700 (P5622_18700) yjzD 3575841..3576026 (+) 186 WP_003245236.1 DUF2929 domain-containing protein -
  P5622_RS18705 (P5622_18705) yjzC 3576072..3576251 (-) 180 WP_003245356.1 YjzC family protein -
  P5622_RS18710 (P5622_18710) argF 3576337..3577296 (-) 960 WP_003232980.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=806466 P5622_RS18680 WP_003224559.1 3572969..3573160(-) (comZ) [Bacillus subtilis strain PRO115]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=806466 P5622_RS18680 WP_003224559.1 3572969..3573160(-) (comZ) [Bacillus subtilis strain PRO115]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1