Detailed information NTG0806418

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: P5622_RS05185
• Genome accession: NZ_CP120598
• Coordinates: 988195..989340 (-)
• Length: 381 a.a.
• NCBI ID: WP_003227549.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain PRO115
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 983195..994340

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P5622_RS05160 (P5622_05160)	pbpG	983448..985523 (-)	2076	WP_003227540.1	transglycosylase domain-containing protein	-
P5622_RS05165 (P5622_05165)	speE	985725..986555 (+)	831	WP_003227543.1	spermidine synthase	-
P5622_RS05170 (P5622_05170)	speB	986616..987488 (+)	873	WP_003227545.1	agmatinase	-
P5622_RS05175 (P5622_05175)	ywhH	987520..987993 (-)	474	WP_003227547.1	YbaK/EbsC family protein	-
P5622_RS05180 (P5622_05180)	phrF	988092..988211 (-)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
P5622_RS05185 (P5622_05185)	rapF	988195..989340 (-)	1146	WP_003227549.1	response regulator aspartate phosphatase RapF	Regulator
P5622_RS21570	-	989343..989573 (+)	231	WP_009968328.1	hypothetical protein	-
P5622_RS05190 (P5622_05190)	ywhK	989570..990925 (+)	1356	WP_003227552.1	YncE family protein	-
P5622_RS05195 (P5622_05195)	ywhL	990964..992340 (+)	1377	WP_003244415.1	YncE family protein	-
P5622_RS05200 (P5622_05200)	albG	992346..993047 (-)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
P5622_RS05205 (P5622_05205)	albF	993044..994324 (-)	1281	WP_003242974.1	pitrilysin family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.09 Da
• Isoelectric Point: 5.1503

>NTDB_id=806418 P5622_RS05185 WP_003227549.1 988195..989340(-) (rapF) [Bacillus subtilis strain PRO115]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=806418 P5622_RS05185 WP_003227549.1 988195..989340(-) (rapF) [Bacillus subtilis strain PRO115]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572