Detailed information NTG0806404

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: P5622_RS01080
• Genome accession: NZ_CP120598
• Coordinates: 189744..190892 (-)
• Length: 382 a.a.
• NCBI ID: WP_003246686.1
• Uniprot ID: A0AAE2V9H5
• Organism: Bacillus subtilis strain PRO115
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 184744..195892

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P5622_RS01050 (P5622_01050)	yclO	185461..186408 (-)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-
P5622_RS01055 (P5622_01055)	ceuB	186401..187351 (-)	951	WP_003234491.1	petrobactin ABC transporter permease YclN	Machinery gene
P5622_RS01060 (P5622_01060)	thrD	187736..189100 (+)	1365	WP_003234493.1	aspartate kinase	-
P5622_RS01065 (P5622_01065)	yczN	189254..189367 (+)	114	WP_003234495.1	YjcZ family sporulation protein	-
P5622_RS01070 (P5622_01070)	yczM	189449..189538 (+)	90	WP_015482794.1	YjcZ family sporulation protein	-
P5622_RS01075 (P5622_01075)	phrC	189638..189760 (-)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
P5622_RS01080 (P5622_01080)	rapC	189744..190892 (-)	1149	WP_003246686.1	response regulator aspartate phosphatase RapC	Regulator
P5622_RS01085 (P5622_01085)	yclK	191055..192476 (-)	1422	WP_009969263.1	two-component system sensor histidine kinase YclK	-
P5622_RS01090 (P5622_01090)	yclJ	192463..193146 (-)	684	WP_003246532.1	two-component system response regulator YclJ	-
P5622_RS01095 (P5622_01095)	yclI	193359..194819 (+)	1461	WP_003234506.1	ABC transporter permease	-
P5622_RS01100 (P5622_01100)	yclH	194835..195515 (+)	681	WP_003234507.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45634.68 Da
• Isoelectric Point: 4.9618

>NTDB_id=806404 P5622_RS01080 WP_003246686.1 189744..190892(-) (rapC) [Bacillus subtilis strain PRO115]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYLDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=806404 P5622_RS01080 WP_003246686.1 189744..190892(-) (rapC) [Bacillus subtilis strain PRO115]
ATGAAGAGTGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCTGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571