Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   P5622_RS01055 Genome accession   NZ_CP120598
Coordinates   186401..187351 (-) Length   316 a.a.
NCBI ID   WP_003234491.1    Uniprot ID   A0AAE2SHG3
Organism   Bacillus subtilis strain PRO115     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 181401..192351
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5622_RS01035 (P5622_01035) ycnB 182269..183687 (+) 1419 WP_003246604.1 MDR family MFS transporter -
  P5622_RS01040 (P5622_01040) yclQ 183734..184687 (-) 954 WP_003246619.1 petrobactin ABC transporter substrate-binding protein YclQ -
  P5622_RS01045 (P5622_01045) yclP 184709..185467 (-) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  P5622_RS01050 (P5622_01050) yclO 185461..186408 (-) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  P5622_RS01055 (P5622_01055) ceuB 186401..187351 (-) 951 WP_003234491.1 petrobactin ABC transporter permease YclN Machinery gene
  P5622_RS01060 (P5622_01060) thrD 187736..189100 (+) 1365 WP_003234493.1 aspartate kinase -
  P5622_RS01065 (P5622_01065) yczN 189254..189367 (+) 114 WP_003234495.1 YjcZ family sporulation protein -
  P5622_RS01070 (P5622_01070) yczM 189449..189538 (+) 90 WP_015482794.1 YjcZ family sporulation protein -
  P5622_RS01075 (P5622_01075) phrC 189638..189760 (-) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  P5622_RS01080 (P5622_01080) rapC 189744..190892 (-) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34899.33 Da        Isoelectric Point: 9.9364

>NTDB_id=806402 P5622_RS01055 WP_003234491.1 186401..187351(-) (ceuB) [Bacillus subtilis strain PRO115]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTVLLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=806402 P5622_RS01055 WP_003234491.1 186401..187351(-) (ceuB) [Bacillus subtilis strain PRO115]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGTGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522