Detailed information NTG0806339

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: P5628_RS19340
• Genome accession: NZ_CP120577
• Coordinates: 3722493..3723638 (+)
• Length: 381 a.a.
• NCBI ID: WP_038829812.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain PRO53
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3717493..3728638

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P5628_RS19320 (P5628_19320)	albF	3717509..3718789 (+)	1281	WP_064671459.1	pitrilysin family protein	-
P5628_RS19325 (P5628_19325)	albG	3718786..3719487 (+)	702	WP_046160959.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
P5628_RS19330 (P5628_19330)	ywhL	3719493..3720869 (-)	1377	WP_277709116.1	YncE family protein	-
P5628_RS19335 (P5628_19335)	ywhK	3720908..3722263 (-)	1356	WP_038829813.1	YncE family protein	-
P5628_RS21340	-	3722260..3722490 (-)	231	Protein_3754	hypothetical protein	-
P5628_RS19340 (P5628_19340)	rapF	3722493..3723638 (+)	1146	WP_038829812.1	response regulator aspartate phosphatase RapF	Regulator
P5628_RS19345 (P5628_19345)	phrF	3723622..3723741 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
P5628_RS19350 (P5628_19350)	ywhH	3723839..3724310 (+)	472	Protein_3757	YbaK/EbsC family protein	-
P5628_RS19355 (P5628_19355)	speB	3724341..3725213 (-)	873	WP_003227545.1	agmatinase	-
P5628_RS19360 (P5628_19360)	speE	3725274..3726104 (-)	831	WP_003227543.1	spermidine synthase	-
P5628_RS19365 (P5628_19365)	pbpG	3726306..3728381 (+)	2076	WP_033883392.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45626.14 Da
• Isoelectric Point: 5.2517

>NTDB_id=806339 P5628_RS19340 WP_038829812.1 3722493..3723638(+) (rapF) [Bacillus subtilis strain PRO53]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFNFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=806339 P5628_RS19340 WP_038829812.1 3722493..3723638(+) (rapF) [Bacillus subtilis strain PRO53]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTAATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.475	100	0.995
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572