Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   P5628_RS16265 Genome accession   NZ_CP120577
Coordinates   3102628..3104946 (-) Length   772 a.a.
NCBI ID   WP_161621287.1    Uniprot ID   -
Organism   Bacillus subtilis strain PRO53     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3097628..3109946
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5628_RS16225 (P5628_16225) mrpB 3098095..3098526 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  P5628_RS16230 (P5628_16230) mrpC 3098526..3098867 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  P5628_RS16235 (P5628_16235) mrpD 3098860..3100341 (+) 1482 WP_041850587.1 Na+/H+ antiporter subunit D -
  P5628_RS16240 (P5628_16240) mrpE 3100347..3100823 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  P5628_RS16245 (P5628_16245) mrpF 3100823..3101107 (+) 285 WP_277709714.1 Na(+)/H(+) antiporter subunit F1 -
  P5628_RS16250 (P5628_16250) mnhG 3101091..3101465 (+) 375 WP_015714623.1 monovalent cation/H(+) antiporter subunit G -
  P5628_RS16255 (P5628_16255) yuxO 3101504..3101884 (-) 381 WP_014477831.1 hotdog fold thioesterase -
  P5628_RS16260 (P5628_16260) comA 3101903..3102547 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  P5628_RS16265 (P5628_16265) comP 3102628..3104946 (-) 2319 WP_161621287.1 sensor histidine kinase Regulator
  P5628_RS16270 (P5628_16270) comX 3104966..3105142 (-) 177 WP_041906074.1 competence pheromone ComX -
  P5628_RS16275 (P5628_16275) - 3105157..3105996 (-) 840 WP_347176368.1 polyprenyl synthetase family protein -
  P5628_RS16280 (P5628_16280) degQ 3106182..3106322 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  P5628_RS16285 (P5628_16285) - 3106544..3106669 (+) 126 WP_161621781.1 hypothetical protein -
  P5628_RS16290 (P5628_16290) - 3106785..3107153 (+) 369 WP_017695529.1 hypothetical protein -
  P5628_RS16295 (P5628_16295) pdeH 3107129..3108358 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 772 a.a.        Molecular weight: 90001.35 Da        Isoelectric Point: 8.6883

>NTDB_id=806328 P5628_RS16265 WP_161621287.1 3102628..3104946(-) (comP) [Bacillus subtilis strain PRO53]
MKNLKRNFSIVLVLFSLLYFAYIVYFTQNGILVGTYVSETANHELKVEKMTKATYGKYMGLKEGDLILEVSGKKPTSENV
KRNYLAKAEHLKVKRDNHEIQLHNTEYISLNNSYSFFIYIIPCIFFALSLLCAFYIYRVNRVKNTYSAYILINFLLFISI
AYLSAGGVTRGYEINRYINLFTFLNVPVLYLHFLYQYFKELSIKFSSRYIVNILYTLPIINVIIEFIQKYLPSGIITNIS
NINLVTFLIEITVVYFCIIYYGIIYRKKDHYYLLKVLLISNTVAFFPFTVLYIMPEVLFGQYIYSAIVTAPFLIIIPLAL
VYQFVVNKIYDIDFILGRIRYYSLLSIIPTIGIVWLSIIFDSKRADFNIILITLCTFIIFLSVFYIKELLDYKFRLKRFS
EKYNYQDSIFKYTQLIKGVSALDQVFKNLKTTILEVLPVSKAYIFEVGADREIIYFDKQSVEPNWRLYKTEFEKVTKEIG
KIIEINQGFLIKVGEKGTSSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENVVQIEELMDHLQALKREGANPVWLK
KLMYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQL
LYDLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYE
DDGVGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2319 bp        

>NTDB_id=806328 P5628_RS16265 WP_161621287.1 3102628..3104946(-) (comP) [Bacillus subtilis strain PRO53]
TTGAAAAACCTTAAAAGAAATTTTTCTATAGTGCTAGTATTATTTAGTCTCTTATATTTTGCTTATATTGTTTATTTCAC
TCAGAATGGTATCTTAGTTGGTACTTATGTTTCTGAAACAGCCAATCATGAGTTAAAAGTTGAAAAAATGACTAAAGCCA
CATATGGAAAATATATGGGCTTAAAAGAAGGCGACTTAATACTCGAGGTAAGTGGGAAGAAACCTACAAGCGAGAATGTT
AAAAGAAATTATTTAGCAAAAGCTGAACATTTAAAAGTTAAAAGGGATAATCATGAAATTCAATTACATAATACGGAGTA
TATCTCTTTAAATAATTCTTATAGCTTTTTCATTTATATTATCCCTTGTATATTTTTTGCTTTGAGTCTGTTATGTGCAT
TTTATATTTATAGGGTCAATCGAGTAAAAAATACGTACTCGGCTTATATTTTGATTAATTTTTTGCTGTTTATATCTATA
GCATATTTAAGTGCTGGAGGCGTAACTAGAGGATATGAAATAAATAGATATATTAATCTTTTTACCTTTTTAAATGTACC
TGTCTTGTATTTGCATTTTCTATATCAATATTTCAAAGAATTAAGCATCAAATTTTCATCACGTTATATCGTGAATATTT
TATACACGTTGCCAATTATCAATGTAATAATAGAGTTCATCCAGAAATACCTTCCTTCGGGGATTATTACGAATATTAGT
AATATCAATTTAGTAACATTCTTAATAGAGATTACAGTTGTTTATTTTTGCATTATCTATTATGGGATAATTTATAGAAA
AAAGGATCATTATTATTTGTTGAAGGTATTATTGATTTCAAATACGGTAGCTTTCTTTCCTTTTACGGTCTTATATATCA
TGCCGGAAGTTTTATTTGGGCAATATATTTACTCAGCAATAGTGACTGCACCATTCTTAATAATTATCCCATTAGCATTG
GTTTATCAATTCGTTGTAAATAAAATTTATGATATAGACTTTATACTAGGCAGAATTAGATATTATAGTTTATTATCCAT
CATACCAACAATAGGCATAGTATGGTTGTCAATAATATTTGATAGCAAAAGAGCGGATTTTAATATCATCTTAATTACGT
TATGTACTTTCATAATTTTCCTGTCGGTCTTTTATATTAAAGAATTACTGGACTATAAATTTCGGTTAAAACGATTTTCG
GAAAAATATAATTATCAAGACAGTATATTTAAATATACGCAATTAATTAAAGGTGTATCAGCTTTAGATCAAGTATTTAA
GAACTTAAAAACAACAATACTAGAAGTTCTACCCGTAAGTAAAGCCTACATCTTTGAAGTTGGTGCTGATAGAGAAATCA
TATACTTTGATAAACAGAGTGTTGAACCCAACTGGAGGCTGTATAAAACAGAATTTGAAAAGGTCACTAAAGAAATAGGG
AAGATTATTGAGATTAACCAAGGCTTTTTGATCAAAGTAGGGGAAAAAGGTACGAGTTCTTATGTATTGCTTTGTTTATC
TAGCATCAATACACCAAGGTTGACAAGAGATGAAATTTCATGGCTGAAAACATTATCGTTTTATACTAGTGTATCCATGG
AAAATGTTGTACAAATTGAAGAACTCATGGATCATTTACAAGCTTTAAAAAGGGAAGGTGCCAACCCCGTATGGCTCAAA
AAACTCATGTACACGATCGAGGAAAAACAACGCTCGGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGAT
TTCCTTAAAACGCCAGTGTGAGCTGTTTTTGGGTGATTTTAAGAAGGATGACAATCCGTGCCGTGAAGAGGTGCAGGACA
AGCTTGTACAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTT
CTGTATGATCTTGGGCTGGTCAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTT
AAATACCGGGAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTA
ATGCGGTCAAGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAG
GATGATGGCGTAGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGT
CAGGGCTTTAGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

64.424

100

0.645