Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   P5628_RS05975 Genome accession   NZ_CP120577
Coordinates   1157863..1158054 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain PRO53     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1152863..1163054
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5628_RS05945 (P5628_05945) argF 1153727..1154686 (+) 960 WP_277709401.1 ornithine carbamoyltransferase -
  P5628_RS05950 (P5628_05950) yjzC 1154772..1154951 (+) 180 WP_003245356.1 YjzC family protein -
  P5628_RS05955 (P5628_05955) yjzD 1154997..1155182 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  P5628_RS05960 (P5628_05960) - 1155431..1156165 (+) 735 WP_032721340.1 hypothetical protein -
  P5628_RS05965 (P5628_05965) - 1156247..1156804 (+) 558 WP_021479559.1 hypothetical protein -
  P5628_RS05970 (P5628_05970) med 1156895..1157848 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  P5628_RS05975 (P5628_05975) comZ 1157863..1158054 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  P5628_RS05980 (P5628_05980) yjzB 1158084..1158320 (-) 237 WP_072173825.1 spore coat protein YjzB -
  P5628_RS05985 (P5628_05985) fabH 1158485..1159423 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  P5628_RS05990 (P5628_05990) fabF 1159446..1160687 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  P5628_RS05995 (P5628_05995) yjaZ 1160763..1161548 (+) 786 WP_049140720.1 DUF2268 domain-containing protein -
  P5628_RS06000 (P5628_06000) appD 1161740..1162726 (+) 987 WP_049140721.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=806287 P5628_RS05975 WP_003224559.1 1157863..1158054(+) (comZ) [Bacillus subtilis strain PRO53]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=806287 P5628_RS05975 WP_003224559.1 1157863..1158054(+) (comZ) [Bacillus subtilis strain PRO53]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1