Detailed information NTG0806286

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: P5628_RS05970
• Genome accession: NZ_CP120577
• Coordinates: 1156895..1157848 (+)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis strain PRO53
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1151895..1162848

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P5628_RS05945 (P5628_05945)	argF	1153727..1154686 (+)	960	WP_277709401.1	ornithine carbamoyltransferase	-
P5628_RS05950 (P5628_05950)	yjzC	1154772..1154951 (+)	180	WP_003245356.1	YjzC family protein	-
P5628_RS05955 (P5628_05955)	yjzD	1154997..1155182 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
P5628_RS05960 (P5628_05960)	-	1155431..1156165 (+)	735	WP_032721340.1	hypothetical protein	-
P5628_RS05965 (P5628_05965)	-	1156247..1156804 (+)	558	WP_021479559.1	hypothetical protein	-
P5628_RS05970 (P5628_05970)	med	1156895..1157848 (+)	954	WP_014476425.1	transcriptional regulator Med	Regulator
P5628_RS05975 (P5628_05975)	comZ	1157863..1158054 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
P5628_RS05980 (P5628_05980)	yjzB	1158084..1158320 (-)	237	WP_072173825.1	spore coat protein YjzB	-
P5628_RS05985 (P5628_05985)	fabH	1158485..1159423 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
P5628_RS05990 (P5628_05990)	fabF	1159446..1160687 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
P5628_RS05995 (P5628_05995)	yjaZ	1160763..1161548 (+)	786	WP_049140720.1	DUF2268 domain-containing protein	-
P5628_RS06000 (P5628_06000)	appD	1161740..1162726 (+)	987	WP_049140721.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=806286 P5628_RS05970 WP_014476425.1 1156895..1157848(+) (med) [Bacillus subtilis strain PRO53]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=806286 P5628_RS05970 WP_014476425.1 1156895..1157848(+) (med) [Bacillus subtilis strain PRO53]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCCTCCTTTACGTGGCAG
CCTGAGGTTGATGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAACAAAGG
CACCCTTGAGGGCGGCGACCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGGACATTCAGCCCGCTCGTCGATA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAATAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997