Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxO   Type   Regulator
Locus tag   RKQ56_RS07810 Genome accession   NZ_CP134583
Coordinates   1632359..1633852 (-) Length   497 a.a.
NCBI ID   WP_004708399.1    Uniprot ID   A0AA36NYD0
Organism   Acinetobacter baumannii strain XH1032     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context

Location: 1627359..1638852
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RKQ56_RS07785 (RKQ56_07795) - 1628451..1629095 (-) 645 WP_004708391.1 hypothetical protein -
  RKQ56_RS07790 (RKQ56_07800) ispF 1629199..1629681 (+) 483 WP_002049661.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
  RKQ56_RS07795 (RKQ56_07805) - 1629678..1630202 (-) 525 WP_004886872.1 protein tyrosine phosphatase family protein -
  RKQ56_RS07800 (RKQ56_07810) argF 1630395..1631315 (-) 921 WP_004708394.1 ornithine carbamoyltransferase -
  RKQ56_RS07805 (RKQ56_07815) adeN 1631429..1632082 (-) 654 WP_176673710.1 multidrug efflux transcriptional repressor AdeN -
  RKQ56_RS07810 (RKQ56_07820) luxO 1632359..1633852 (-) 1494 WP_004708399.1 nitrogen regulation protein NR(I) Regulator
  RKQ56_RS07815 (RKQ56_07825) glnL 1633839..1634948 (-) 1110 WP_176673659.1 nitrogen regulation protein NR(II) -
  RKQ56_RS07820 (RKQ56_07830) rimO 1635290..1636633 (+) 1344 WP_000856678.1 30S ribosomal protein S12 methylthiotransferase RimO -
  RKQ56_RS07825 (RKQ56_07835) pyrH 1636685..1637413 (+) 729 WP_000852257.1 UMP kinase -
  RKQ56_RS07830 (RKQ56_07840) frr 1637499..1638053 (+) 555 WP_002049637.1 ribosome recycling factor -
  RKQ56_RS07835 (RKQ56_07845) uppS 1638058..1638810 (+) 753 WP_004708401.1 polyprenyl diphosphate synthase -

Sequence

Protein


Download         Length: 497 a.a.        Molecular weight: 56250.08 Da        Isoelectric Point: 6.3154

>NTDB_id=806015 RKQ56_RS07810 WP_004708399.1 1632359..1633852(-) (luxO) [Acinetobacter baumannii strain XH1032]
MSRNKIWVIDDDRAMRWVLEKTFKEEGFDVTNFEEAQTALERLHHDAPDVILTDIRMPGIDGLTFLSKVKNSHPDLPVII
MTAHSDLESAVSSYQTGAFEYLPKPFDIDEALALVNRAILHINKLQQQEATKTASPLQSTEIIGESPAMQEVFRAIGRLS
QSHITVLINGESGTGKELVAHALHKHSPRRAKPFIALNMAAIPKDLIETELFGHEKGAFTGANTQHQGRFEQANGGTLFL
DEIGDMPFETQTRLLRVLADGEFYRVGGHIPVKVDVRIVAATHQDLEKLVNEGRFREDLYHRLNVIRIHIPKLAHRSEDI
PMLAQHFLARAGKELGVSPKILRTETTDYMQQLPWPGNVRQLENTCRWLTVMITGREVYPEDLPSELKQVPLQKNSEASQ
PAPSFERISLHHWDELLSQWAIQKLKNGEMKILDIATPMFERTLINAALQQTRGRKRHAAELLGWGRNTLTRKLKELGMD
SADDDDEDEHKVTLSEA

Nucleotide


Download         Length: 1494 bp        

>NTDB_id=806015 RKQ56_RS07810 WP_004708399.1 1632359..1633852(-) (luxO) [Acinetobacter baumannii strain XH1032]
GTGTCGCGAAATAAAATATGGGTTATTGATGACGATCGCGCCATGCGATGGGTACTTGAAAAGACCTTTAAAGAAGAAGG
ATTTGACGTCACCAATTTTGAAGAAGCTCAAACAGCACTCGAACGTTTACATCATGATGCGCCGGATGTCATCTTAACTG
ACATCCGTATGCCAGGCATTGATGGGTTAACTTTCTTATCTAAAGTAAAAAACTCTCATCCTGATTTGCCTGTGATCATT
ATGACAGCGCATTCGGACTTAGAGTCTGCTGTATCTAGCTATCAAACTGGTGCATTTGAGTATTTACCAAAACCGTTTGA
TATTGATGAAGCTTTAGCTTTAGTCAATCGAGCAATTTTACATATCAATAAATTGCAGCAACAAGAGGCTACAAAAACTG
CTTCTCCGCTACAATCGACAGAAATTATTGGTGAATCTCCAGCTATGCAAGAGGTTTTCCGAGCAATTGGTCGCTTATCT
CAGTCGCATATTACCGTTTTAATTAATGGTGAGTCAGGAACAGGTAAAGAATTAGTTGCACATGCTTTACATAAGCATTC
ACCACGCAGAGCCAAACCATTTATTGCTCTAAACATGGCAGCAATTCCGAAAGACTTAATTGAAACGGAATTATTTGGCC
ATGAAAAAGGTGCTTTTACTGGCGCTAATACTCAACATCAAGGTCGCTTTGAACAAGCCAATGGCGGCACTCTCTTCCTT
GATGAAATTGGTGACATGCCATTTGAAACACAGACGCGATTACTACGTGTACTCGCAGATGGTGAGTTTTACCGCGTTGG
CGGGCATATCCCTGTTAAAGTTGATGTTCGGATCGTAGCGGCAACACACCAAGATTTAGAAAAATTGGTAAATGAAGGTC
GCTTCCGTGAAGACTTATACCACCGTCTAAATGTAATTCGTATTCATATTCCTAAGCTTGCACATCGAAGTGAAGATATT
CCGATGTTAGCTCAACATTTCTTGGCTCGTGCTGGTAAAGAGTTAGGCGTAAGTCCAAAGATTTTACGTACCGAGACAAC
TGACTATATGCAGCAATTACCATGGCCCGGTAATGTTCGTCAGCTTGAAAATACCTGCCGCTGGTTAACCGTCATGATTA
CTGGCCGTGAGGTTTACCCAGAAGATTTACCTTCAGAACTTAAACAAGTTCCACTCCAAAAAAATAGTGAAGCTAGCCAA
CCTGCTCCATCTTTTGAGCGTATTTCTTTACATCATTGGGATGAGCTACTAAGTCAATGGGCAATTCAAAAACTCAAAAA
TGGCGAAATGAAGATTTTGGATATTGCTACACCAATGTTTGAGCGTACTTTAATTAATGCTGCACTACAGCAAACTCGTG
GGCGCAAACGTCATGCAGCCGAGCTATTAGGTTGGGGTCGTAACACTCTAACCCGAAAGTTAAAAGAACTAGGTATGGAT
TCTGCTGATGACGATGATGAGGATGAACACAAAGTAACTTTGTCTGAAGCTTAA

Domains

Predicted by InterProScan.

Bacterial regulatory protein, Fis family (HTH_8)

(439-477)

Response regulator receiver domain (Response_reg)

(6-115)

Sigma-54 interaction domain (Sigma54_activat)

(142-309)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36NYD0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

40.402

90.141

0.364
  pilR Pseudomonas aeruginosa PAK

37.5

96.579

0.362