Detailed information NTG0805849

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: P3R60_RS04675
• Genome accession: NZ_CP120510
• Coordinates: 942908..945346 (-)
• Length: 812 a.a.
• NCBI ID: WP_278024870.1
• Uniprot ID: -
• Organism: Streptococcus pluranimalium strain SP21-2
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 937908..950346

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P3R60_RS04655	-	938926..939684 (-)	759	WP_218653923.1	PrsW family glutamic-type intramembrane protease	-
P3R60_RS04660	-	939758..940474 (-)	717	WP_218653922.1	type II CAAX prenyl endopeptidase Rce1 family protein	-
P3R60_RS04665	-	940648..942009 (-)	1362	WP_278024871.1	HAMP domain-containing sensor histidine kinase	-
P3R60_RS04670	-	942011..942682 (-)	672	WP_218653920.1	response regulator transcription factor	-
P3R60_RS04675	clpC	942908..945346 (-)	2439	WP_278024870.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
P3R60_RS04680	-	945346..945807 (-)	462	WP_218653918.1	CtsR family transcriptional regulator	-
P3R60_RS04685	-	945988..946455 (+)	468	WP_316606750.1	small multi-drug export protein	-
P3R60_RS04690	-	946723..947868 (-)	1146	WP_316606751.1	MFS transporter	-
P3R60_RS04695	tsf	947960..949000 (-)	1041	WP_316606752.1	translation elongation factor Ts	-
P3R60_RS04700	rpsB	949188..949955 (-)	768	WP_316606753.1	30S ribosomal protein S2	-

Sequence

Protein

• Length: 812 a.a.
• Molecular weight: 90209.34 Da
• Isoelectric Point: 5.4230

>NTDB_id=805849 P3R60_RS04675 WP_278024870.1 942908..945346(-) (clpC) [Streptococcus pluranimalium strain SP21-2]
MVKYSQKMQDVFGLSQIIATRFSCQLLESWHLLLGLISSDETIAGLTFREFDSETGENDYFAAAILASEKTFDDSINHFD
FHEQSVATADMLAFAEQISLITGDDEVGTEHVLMAMLLSPDRMPIRVLELAGFKLKNDGEGASIFSIRQGLEKHAGFTKD
QVKDIHELKKPKRPKANNFTDMMKPPSTAGELSDFTRDLTAMAEAGALEAVVGRDKEVSRMVQVLSRKTKNNPVLVGDAG
VGKTALAYGLAQRIASGEIPYELRDMRVLELDMMSVVAGTRFRGDFEERMNQIIDDIEADGHIILFVDEMHTIMGSGSGI
DSTLDAANILKPALSRGTLHMVGATTQEEYQKHIEKDAALSRRFAKIIIEEPSVADAFEILKGLRPSYEAYHHVSLSDEA
LMTAVKSAHRYMTSKNLPDSAIDLMDEASATVQTMVKKEAQAELSPIDEALLDGDFKAVSRLLKKEEKVSLPKVIKVTEE
HIMSTLSRLTGIPVEKMTQADNQKYLNLEKELHKRVIGQDTAISAISRAIRRNQSGIRTGKRPIGSFMFLGPTGVGKTEL
AKALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYDEGGELTEKVRQKPYSVLLFDEVEKAHPDIFNVLLQVL
DDGMLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGVQDLSHDHDAMEKRILEELKKAYRPEFINRIDEKVVFHSL
TQDHMREVVKIMVQPLIKQLAEKGIVLKFQPSALKHLAEDGYDIEMGARPLRRTIQTQVEDHLAELVLSGQLATGNTLKV
GVKQGKLKFDVI

Nucleotide

• Length: 2439 bp

>NTDB_id=805849 P3R60_RS04675 WP_278024870.1 942908..945346(-) (clpC) [Streptococcus pluranimalium strain SP21-2]
ATGGTTAAGTATTCACAAAAAATGCAGGATGTTTTTGGCCTGTCTCAAATTATTGCTACACGATTTTCTTGTCAGCTCTT
AGAAAGTTGGCATCTTTTACTTGGATTGATTTCTAGTGATGAAACAATTGCAGGGTTGACTTTCCGAGAATTCGATAGCG
AAACTGGTGAGAATGATTATTTTGCAGCAGCTATTTTAGCGTCAGAAAAGACTTTTGACGATAGTATCAATCACTTTGAT
TTTCATGAACAATCAGTTGCAACGGCTGATATGTTGGCTTTTGCGGAGCAAATTAGCCTTATTACTGGAGATGATGAAGT
CGGTACGGAGCATGTTCTCATGGCTATGCTTTTGAGTCCTGACAGGATGCCTATCCGTGTCCTTGAGTTAGCTGGTTTCA
AACTAAAAAATGATGGTGAAGGTGCTTCAATTTTTAGTATTCGCCAAGGTTTAGAGAAGCATGCTGGTTTTACGAAAGAC
CAAGTCAAGGACATTCATGAATTGAAAAAACCAAAACGTCCTAAAGCGAACAATTTTACAGATATGATGAAACCACCGTC
AACTGCAGGTGAGTTATCGGATTTTACTCGCGATTTGACAGCCATGGCGGAAGCTGGAGCTCTCGAAGCAGTTGTTGGTC
GTGACAAAGAAGTCTCTCGCATGGTACAGGTGCTTAGCCGTAAAACCAAGAATAACCCAGTCTTAGTTGGTGATGCTGGT
GTTGGTAAAACTGCCCTAGCTTATGGATTAGCACAACGTATTGCGAGTGGTGAGATTCCTTATGAGTTACGCGACATGCG
CGTTCTTGAATTGGACATGATGAGTGTAGTTGCGGGAACGCGTTTCCGTGGTGACTTTGAAGAGCGTATGAACCAAATTA
TTGATGATATTGAAGCTGATGGTCATATCATTCTCTTTGTGGATGAGATGCATACTATCATGGGTTCTGGTAGTGGTATT
GATAGCACACTTGATGCGGCTAATATCCTAAAGCCTGCTCTTTCTCGTGGAACCCTCCACATGGTTGGGGCTACAACACA
AGAAGAGTACCAAAAACACATCGAAAAGGACGCTGCCTTGTCACGTCGCTTTGCTAAAATTATTATTGAAGAGCCATCAG
TTGCAGATGCTTTTGAGATTTTGAAAGGATTACGTCCGAGTTATGAAGCCTATCATCATGTGTCACTATCAGATGAAGCT
TTGATGACAGCGGTTAAGTCTGCTCACCGTTACATGACCAGTAAAAACCTACCTGATTCAGCTATCGATTTGATGGATGA
AGCCAGCGCGACGGTTCAGACGATGGTCAAAAAAGAAGCGCAAGCAGAGCTATCTCCTATTGATGAAGCCCTTTTAGATG
GTGATTTTAAAGCTGTCTCTCGTTTGCTTAAGAAGGAGGAGAAGGTGTCTCTTCCAAAAGTTATCAAGGTAACCGAAGAG
CACATCATGTCTACCCTCAGTCGTCTAACAGGAATTCCTGTGGAAAAAATGACACAGGCTGACAATCAGAAGTATCTCAA
CTTGGAAAAAGAGTTGCATAAGCGTGTGATTGGGCAAGATACGGCGATTTCGGCGATTAGTCGGGCAATTCGTCGTAACC
AGTCGGGCATTAGGACTGGTAAACGTCCTATCGGATCTTTCATGTTCTTGGGACCAACTGGAGTTGGTAAGACGGAACTG
GCTAAGGCCTTGGCGGAAGTCCTTTTTGATGATGAATCAGCCCTCATTCGTTTTGACATGTCTGAGTATATGGAAAAATT
TGCCGCCTCACGTCTTAACGGTGCTCCTCCGGGTTATGTCGGCTACGATGAAGGGGGAGAATTAACAGAGAAAGTTCGTC
AGAAACCTTATTCTGTCCTCTTATTTGATGAGGTTGAAAAGGCACATCCAGATATTTTTAATGTTCTTTTGCAAGTGCTA
GATGATGGGATGTTGACGGATAGTCGTGGACGCAAAGTGGATTTTTCAAATACGATTATCATCATGACGTCAAATCTTGG
TGCTACAGCTCTTCGTGATGATAAGACAGTTGGCTTTGGCGTTCAGGATCTCTCACATGACCATGATGCTATGGAAAAAC
GTATCTTGGAAGAGCTTAAAAAAGCTTATCGTCCTGAATTTATCAACCGTATTGATGAGAAAGTTGTCTTCCATAGCTTA
ACACAAGATCACATGAGAGAAGTCGTTAAGATTATGGTTCAACCGTTAATCAAGCAGTTAGCTGAGAAAGGTATTGTCTT
AAAATTCCAACCATCAGCCCTTAAACATTTGGCTGAAGATGGTTACGATATCGAAATGGGAGCTCGGCCACTTCGTCGCA
CCATTCAAACCCAAGTCGAAGACCACCTAGCAGAATTAGTTCTTTCAGGACAATTAGCCACAGGCAATACCCTCAAAGTT
GGCGTTAAACAAGGCAAGCTTAAATTTGATGTGATTTGA

Domains

Predicted by InterproScan.

• AAA lid domain (AAA_lid_9) (373-449)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (22-50)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (95-136)

• AAA domain (Cdc48 subfamily) (AAA_2) (542-713)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (720-800)

• ATPase family associated with various cellular activities (AAA) (AAA) (234-368)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Streptococcus mutans UA159	71.587	100	0.717
clpC	Streptococcus thermophilus LMG 18311	70.956	100	0.713
clpC	Streptococcus thermophilus LMD-9	70.833	100	0.712
clpC	Streptococcus pneumoniae Rx1	65.314	100	0.654
clpC	Streptococcus pneumoniae TIGR4	65.314	100	0.654
clpC	Streptococcus pneumoniae D39	65.314	100	0.654
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	48.148	100	0.496
clpC	Bacillus subtilis subsp. subtilis str. 168	44.753	100	0.457