Detailed information NTG0805748

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: RKQ60_RS16925
• Genome accession: NZ_CP134571
• Coordinates: 3484015..3485328 (-)
• Length: 437 a.a.
• NCBI ID: WP_001289250.1
• Uniprot ID: A3M1Y8
• Organism: Acinetobacter baumannii strain XH1036
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3479015..3490328

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RKQ60_RS16910 (RKQ60_16930)	-	3480904..3482430 (+)	1527	WP_000207467.1	fumarate hydratase	-
RKQ60_RS16915 (RKQ60_16935)	-	3482572..3483126 (+)	555	WP_000155519.1	DUF2059 domain-containing protein	-
RKQ60_RS16920 (RKQ60_16940)	-	3483151..3483867 (-)	717	WP_001269745.1	DUF2846 domain-containing protein	-
RKQ60_RS16925 (RKQ60_16945)	clpX	3484015..3485328 (-)	1314	WP_001289250.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
RKQ60_RS16930 (RKQ60_16950)	clpP	3485430..3486035 (-)	606	WP_000289452.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	-
RKQ60_RS16935 (RKQ60_16955)	tig	3486228..3487562 (-)	1335	WP_001198432.1	trigger factor	-
RKQ60_RS16940 (RKQ60_16960)	-	3487977..3490208 (+)	2232	WP_000052887.1	TonB-dependent siderophore receptor	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 48082.87 Da
• Isoelectric Point: 4.9985

>NTDB_id=805748 RKQ60_RS16925 WP_001289250.1 3484015..3485328(-) (clpX) [Acinetobacter baumannii strain XH1036]
MSEHPQGQKHCSFCGKTQSEVGKLIAGEDAYICNECVDVCLDLVQTSQQVEAGDWASKALPKPHEIRAALDQYVIGQDLA
KKTLSVAVYNHYKRLKVGQSGHVSKDVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENI
VQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGGRKHPQQEFIQIDTS
NILFICGGAFAGLEKIVQQRQEKGGIGFTADVKNKDETKKLAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEAL
MQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDLPSRTDVGTVFINEAV
INGEAEPVYKSERQPKEAVTHESVAKADLKVIDSKSA

Nucleotide

• Length: 1314 bp

>NTDB_id=805748 RKQ60_RS16925 WP_001289250.1 3484015..3485328(-) (clpX) [Acinetobacter baumannii strain XH1036]
ATGTCCGAACATCCTCAAGGACAAAAACATTGTTCATTTTGCGGTAAAACGCAGTCTGAAGTCGGGAAACTGATTGCGGG
CGAGGACGCATATATTTGTAATGAGTGTGTAGATGTCTGCTTAGACCTTGTACAAACCAGCCAACAGGTTGAAGCAGGTG
ACTGGGCAAGCAAGGCATTGCCAAAACCACATGAAATACGTGCTGCGCTTGATCAATATGTGATTGGTCAGGATCTTGCC
AAAAAGACATTATCTGTTGCCGTTTATAACCATTATAAGCGTTTAAAAGTCGGGCAATCTGGTCATGTGTCTAAAGATGT
GGAAATTGCTAAAAGTAACATTCTACTGATTGGGCCTACCGGTTCAGGTAAAACATTACTTGCTCAAACATTGGCTCGTT
TATTAGATGTGCCGTTTGCAATGGCAGATGCGACTACTTTGACGGAAGCGGGTTATGTTGGCGAAGACGTTGAAAATATC
GTACAAAAACTTTTGCAAAAAGCAGATTACGATGTAGAAAAAGCTCAAAAGGGTATTATCTACATTGATGAAATCGACAA
AATTACACGTAAATCTGAAAATCCGTCGATTACTCGTGACGTGTCTGGTGAAGGTGTACAACAAGCTTTGCTTAAGATGA
TTGAAGGTACTGTAGCCTCAATTCCACCACAAGGTGGACGTAAGCATCCACAGCAAGAGTTCATTCAAATTGATACCTCA
AATATCCTATTTATTTGTGGTGGTGCATTTGCTGGACTGGAAAAAATTGTACAACAGCGTCAAGAGAAAGGCGGAATTGG
CTTTACGGCTGATGTTAAAAACAAAGATGAAACCAAAAAACTTGCTGAATTATTCCGTCAAGTTGAGCCAACTGATTTAG
TTAAATTTGGTTTAATTCCAGAATTCATTGGCCGTTTACCAGTGATTGCAACGCTTGAAGAGCTTGATGAAGAAGCGTTA
ATGCAAATTTTGACTGAACCGAAAAATGCATTAACTCGTCAGTATCAATACCTGTTCAATATGGAAAATGTTGACCTCGT
ATTTGAAGATTCAGCTTTACGTGCAGTGGCTAAGCGTGCGCTTGAGCGTAATACCGGAGCTCGTGGCCTACGCTCGATTT
TGGAAAATGTTCTACTTGAAACGATGTATGACTTGCCAAGCCGTACAGATGTAGGAACAGTTTTCATTAATGAAGCAGTT
ATTAATGGTGAAGCTGAACCTGTCTACAAGTCAGAACGTCAGCCTAAAGAAGCAGTAACACATGAAAGTGTTGCTAAGGC
AGATTTAAAAGTAATTGATTCGAAGTCTGCTTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (315-390)

• ClpX C4-type zinc finger (zf-C4_ClpX) (9-45)

• AAA domain (Cdc48 subfamily) (AAA_2) (111-309)

3D structure

• AlphaFold DB: A3M1Y8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	59.453	91.991	0.547
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.426	92.449	0.531