Detailed information NTG0805515

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: P5V12_RS01605
• Genome accession: NZ_CP120416
• Coordinates: 347691..349076 (-)
• Length: 461 a.a.
• NCBI ID: WP_316955488.1
• Uniprot ID: A0AA96HMR7
• Organism: Teredinibacter sp. KSP-S5-2
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 342691..354076

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P5V12_RS01595 (P5V12_01595)	-	346565..347008 (+)	444	WP_316955486.1	type IV pilin protein	-
P5V12_RS01600 (P5V12_01600)	-	347032..347583 (-)	552	WP_316955487.1	GspH/FimT family pseudopilin	-
P5V12_RS01605 (P5V12_01605)	pilR	347691..349076 (-)	1386	WP_316955488.1	sigma-54 dependent transcriptional regulator	Regulator
P5V12_RS01610 (P5V12_01610)	-	349090..350685 (-)	1596	WP_316955489.1	sensor histidine kinase	-
P5V12_RS01615 (P5V12_01615)	-	350744..352375 (+)	1632	WP_316955490.1	NAD+ synthase	-
P5V12_RS01620 (P5V12_01620)	-	352390..353298 (-)	909	WP_316955491.1	outer membrane protein assembly factor BamD	-

Sequence

Protein

• Length: 461 a.a.
• Molecular weight: 50935.96 Da
• Isoelectric Point: 5.4931

>NTDB_id=805515 P5V12_RS01605 WP_316955488.1 347691..349076(-) (pilR) [Teredinibacter sp. KSP-S5-2]
MQKHRALIIDDEPDIRELLGLTLNRMGIDVDTAADISSAKALLEGSNYNICLTDMKLPDGNGIDFVKHAQKAAPNMPIAV
ITAHGNMDTAIQSLKAGAFDFLTKPIDLSSLRELILSAINTNTIHSNTDLDTGIIGKSESIIQLNKAIKKLSRSQAPVYI
SGESGSGKELVARSIHSLSSRQDHPFIPVNCGAIPRDLMESEFFGHKKGTFTGATQDKTGLFQAAEGGTLFLDEVADLPI
DMQVKLLRAIQEKAIRPIGSNSELKTNVRILSATHKNLGALVEQGEFRQDLFYRLNVIHISVPALRERKADIPTLAEYLL
DKIQSEDEDRKLTLASDAITALQRYSFPGNIRELENILERAYTLCETNNIHEQDLQLGSNLGVISSPTTETELLSEPTKT
DHFIQSQNYPSLDDYLGEIEKEILCSALDSVRWNKTLAAKKLGITFRSLRYRLQKLGIDTD

Nucleotide

• Length: 1386 bp

>NTDB_id=805515 P5V12_RS01605 WP_316955488.1 347691..349076(-) (pilR) [Teredinibacter sp. KSP-S5-2]
ATGCAAAAACATCGGGCACTAATAATTGATGACGAACCGGACATTCGTGAGCTGTTAGGTTTAACACTAAACAGAATGGG
AATCGATGTCGACACAGCCGCGGATATCTCCAGCGCCAAGGCCTTACTAGAAGGCTCAAATTACAATATATGCCTAACAG
ACATGAAACTTCCCGATGGAAACGGGATTGATTTTGTCAAACATGCACAAAAAGCCGCGCCCAATATGCCCATCGCTGTT
ATCACAGCCCACGGAAACATGGATACAGCTATCCAATCCCTAAAGGCTGGCGCATTTGATTTTTTAACTAAACCTATCGA
TTTATCCTCTCTAAGAGAGTTAATTCTTTCCGCGATAAACACCAATACAATTCACTCCAATACCGATCTCGACACAGGGA
TCATTGGCAAATCCGAATCCATTATCCAGCTAAACAAAGCCATTAAAAAACTCTCTCGCTCACAAGCGCCGGTTTATATC
AGTGGTGAATCGGGAAGCGGGAAAGAACTTGTTGCCCGCTCAATACACAGCCTAAGCTCCAGGCAAGATCATCCATTTAT
TCCAGTAAACTGCGGAGCTATCCCCCGAGATTTGATGGAAAGTGAATTTTTCGGCCATAAAAAGGGGACGTTCACAGGCG
CAACTCAGGATAAAACGGGGTTATTTCAGGCAGCAGAAGGTGGCACGTTATTTCTGGACGAGGTTGCAGACTTGCCCATT
GATATGCAGGTTAAATTGCTTAGAGCGATACAAGAAAAAGCGATTCGCCCCATAGGATCAAACAGTGAACTTAAAACAAA
TGTAAGGATTTTATCGGCAACCCACAAAAATTTAGGTGCCCTTGTCGAACAAGGTGAGTTCCGTCAGGATCTATTTTATC
GACTAAATGTTATCCACATTAGCGTGCCAGCATTAAGAGAAAGAAAAGCAGATATTCCAACTCTTGCCGAATACCTACTC
GACAAAATACAAAGTGAAGACGAAGACAGAAAACTCACCCTTGCTTCTGATGCCATTACTGCATTACAGCGATATTCTTT
CCCAGGCAACATTCGTGAACTGGAAAACATATTGGAAAGGGCTTATACACTTTGCGAAACAAACAACATCCATGAGCAGG
ACCTACAGTTAGGTTCAAACCTTGGCGTAATATCCTCGCCCACTACAGAAACAGAATTATTAAGCGAACCAACGAAAACA
GACCACTTTATACAAAGCCAAAACTACCCCTCTCTTGATGATTATTTAGGAGAAATTGAAAAGGAAATATTGTGTTCAGC
TCTGGACTCCGTTCGCTGGAATAAAACCCTAGCGGCCAAAAAGCTGGGTATCACTTTTCGCTCTCTCCGCTACCGACTTC
AAAAACTGGGAATTGATACCGATTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (416-456)

• Response regulator receiver domain (Response_reg) (7-115)

• Sigma-54 interaction domain (Sigma54_activat) (134-300)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	55.87	99.783	0.557
pilR	Acinetobacter baumannii strain A118	49.892	100	0.503