Detailed information NTG0805201

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: PVE35_RS20185
• Genome accession: NZ_CP120359
• Coordinates: 4386248..4387588 (-)
• Length: 446 a.a.
• NCBI ID: WP_268178860.1
• Uniprot ID: -
• Organism: Pseudomonas sp. AA-38
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 4381248..4392588

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PVE35_RS20170	trxB	4383037..4383984 (-)	948	WP_277372788.1	thioredoxin-disulfide reductase	-
PVE35_RS20175	cysZ	4384243..4384974 (+)	732	WP_268178858.1	sulfate transporter CysZ	-
PVE35_RS20180	-	4385043..4386239 (+)	1197	WP_268178859.1	glycosyltransferase family 1 protein	-
PVE35_RS20185	pilR	4386248..4387588 (-)	1341	WP_268178860.1	sigma-54 dependent transcriptional regulator	Regulator
PVE35_RS20190	pilS	4387591..4389192 (-)	1602	WP_268178862.1	ATP-binding protein	Regulator
PVE35_RS20195	-	4389176..4389418 (-)	243	WP_268178864.1	PP0621 family protein	-
PVE35_RS20200	-	4389590..4390582 (-)	993	WP_268178866.1	outer membrane protein assembly factor BamD	-
PVE35_RS20205	rluD	4390722..4391696 (+)	975	WP_268178868.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
PVE35_RS20210	pgeF	4391693..4392424 (+)	732	WP_277372789.1	peptidoglycan editing factor PgeF	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 49875.31 Da
• Isoelectric Point: 5.6250

>NTDB_id=805201 PVE35_RS20185 WP_268178860.1 4386248..4387588(-) (pilR) [Pseudomonas sp. AA-38]
MTRQRALIVDDEPDIRELLEITLGRMKLDTRSARNVKEAREWLAREPFDLCLTDMRLPDGTGLDLVQHIQQRHPQVPVAM
ITAYGSLDTAINALKAGAFDFVTKPVELGRLRELVAAAMRLRTPEDQEAPVDSRLLGESPPMKALRKQIHKLARSQAPVY
ISGESGSGKELVARLIHEQGPRAERPFVPVNCGAIPTELMESEFFGHKKGSFTGAIEDKQGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRAVGGQQEVVVDVRILCATHKDLAAEVAAGRFRQDLYYRLNVIELRVPPLRERREDIAQLAEVM
LARLAEGSGLEPARLQAEALEKLKNYRFPGNVRELENMLERAYTLCEDDQISAADLRLADACSPAGEAGEASLAQIDNLE
DYLEDIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGID

Nucleotide

• Length: 1341 bp

>NTDB_id=805201 PVE35_RS20185 WP_268178860.1 4386248..4387588(-) (pilR) [Pseudomonas sp. AA-38]
ATGACCCGCCAGAGAGCCTTGATCGTCGACGACGAACCGGATATCCGCGAATTGCTGGAAATCACCCTGGGCCGCATGAA
GCTGGACACCCGTAGCGCACGCAACGTCAAGGAAGCGCGCGAGTGGCTGGCCCGCGAGCCCTTCGACCTGTGCCTGACCG
ACATGCGCCTGCCCGATGGCACCGGTCTGGATCTGGTGCAGCACATCCAGCAGCGTCACCCACAGGTGCCGGTGGCGATG
ATCACCGCCTACGGCAGCCTCGATACCGCGATCAATGCGCTCAAGGCTGGCGCCTTCGACTTCGTCACCAAACCGGTGGA
GCTGGGCCGGCTGCGCGAACTGGTGGCCGCTGCCATGCGCCTGCGCACCCCGGAGGATCAGGAGGCACCCGTCGACAGCC
GCCTGCTCGGCGAGTCGCCGCCGATGAAGGCACTGCGCAAGCAGATCCACAAGCTCGCGCGCAGTCAGGCGCCGGTGTAC
ATCAGCGGCGAGTCGGGCAGCGGCAAGGAACTGGTGGCGCGCCTGATTCACGAGCAGGGCCCGCGCGCCGAGCGGCCCTT
CGTCCCGGTCAACTGCGGGGCGATTCCCACCGAGCTGATGGAAAGCGAATTCTTCGGCCACAAGAAAGGCAGCTTCACCG
GCGCTATCGAAGATAAGCAGGGCCTGTTCCAGGCGGCCAACGGCGGCACCCTGTTCCTCGATGAGGTGGCCGACCTGCCA
TTGCCGATGCAGGTCAAGCTGCTGCGTGCCATCCAGGAGAAGGCCGTGCGCGCGGTGGGTGGGCAGCAGGAAGTGGTGGT
CGACGTGCGCATCCTCTGCGCCACGCACAAGGATCTGGCAGCCGAGGTGGCGGCGGGGCGTTTTCGTCAGGATCTCTACT
ACCGCCTCAATGTCATCGAGCTGCGCGTGCCGCCCCTGCGCGAGCGCCGCGAGGACATCGCCCAACTGGCCGAAGTGATG
CTGGCGCGGCTGGCCGAAGGCAGCGGCCTGGAGCCAGCCAGGCTGCAAGCCGAGGCCCTGGAAAAGCTGAAGAACTACCG
CTTCCCTGGCAACGTGCGGGAGCTGGAGAACATGCTCGAGCGCGCCTACACCCTCTGCGAGGACGACCAGATCAGCGCCG
CTGACCTGCGCCTGGCCGATGCCTGCAGCCCCGCGGGGGAGGCCGGGGAGGCCAGCCTGGCGCAGATCGACAACCTCGAG
GACTACCTAGAGGACATCGAGCGCAAGCTGATCATGCAGGCGCTGGAGGAAACCCGCTGGAATCGCACGGCGGCGGCCCA
GCGCCTGGGGCTGACCTTCCGCTCGATGCGCTATCGCCTGAAGAAACTCGGTATCGACTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-115)

• Bacterial regulatory protein, Fis family (HTH_8) (403-443)

• Sigma-54 interaction domain (Sigma54_activat) (135-301)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	88.565	100	0.886
pilR	Acinetobacter baumannii strain A118	50.327	100	0.518