Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PVE35_RS01695 Genome accession   NZ_CP120359
Coordinates   363463..363870 (+) Length   135 a.a.
NCBI ID   WP_268179621.1    Uniprot ID   -
Organism   Pseudomonas sp. AA-38     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 358463..368870
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PVE35_RS01665 - 358612..359619 (-) 1008 WP_268179629.1 aspartate carbamoyltransferase catalytic subunit -
  PVE35_RS01670 pyrR 359631..360137 (-) 507 WP_268179627.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  PVE35_RS01675 ruvX 360164..360601 (-) 438 WP_268184412.1 Holliday junction resolvase RuvX -
  PVE35_RS01680 - 360598..361167 (-) 570 WP_268179626.1 YqgE/AlgH family protein -
  PVE35_RS01685 - 361278..362174 (-) 897 WP_277373579.1 energy transducer TonB -
  PVE35_RS01690 gshB 362261..363217 (-) 957 WP_268179623.1 glutathione synthase -
  PVE35_RS01695 pilG 363463..363870 (+) 408 WP_268179621.1 twitching motility response regulator PilG Regulator
  PVE35_RS01700 pilH 363917..364282 (+) 366 WP_268179619.1 twitching motility response regulator PilH -
  PVE35_RS01705 - 364391..364927 (+) 537 WP_268179617.1 chemotaxis protein CheW -
  PVE35_RS01710 - 365012..367048 (+) 2037 WP_268179615.1 methyl-accepting chemotaxis protein -
  PVE35_RS01715 - 367115..367975 (+) 861 WP_268184410.1 protein-glutamate O-methyltransferase -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14817.22 Da        Isoelectric Point: 6.7047

>NTDB_id=805179 PVE35_RS01695 WP_268179621.1 363463..363870(+) (pilG) [Pseudomonas sp. AA-38]
MEQHCDGLKVMVIDDSKTIRRTAETLLKKVGCEVITAVDGFDALAKIADTHPSIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKTHVPDFTPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=805179 PVE35_RS01695 WP_268179621.1 363463..363870(+) (pilG) [Pseudomonas sp. AA-38]
ATGGAACAGCATTGCGACGGCTTGAAAGTGATGGTGATCGACGACTCGAAGACGATTCGTCGCACTGCGGAAACCTTGCT
GAAGAAGGTGGGCTGCGAAGTCATCACTGCGGTCGACGGCTTCGATGCCTTGGCCAAGATCGCCGACACCCATCCAAGCA
TCATCTTTGTCGACATCATGATGCCGCGTCTCGATGGTTATCAGACCTGTGCCCTGATCAAGAACAACAGTGCTTTCAAA
TCCACCCCGGTGATCATGCTGTCCTCCAAGGATGGTCTGTTCGACAAGGCCAAAGGACGCATCGTGGGTTCCGATCAGTA
TCTGACCAAGCCCTTCAGCAAGGAAGAGCTGCTCGGTGCCATCAAGACTCATGTGCCGGACTTCACTCCGGTAGAACAAG
CCTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76.8

92.593

0.711
  vicR Streptococcus mutans UA159

41.27

93.333

0.385