Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   L6480_RS06230 Genome accession   NZ_AP022981
Coordinates   1210117..1210293 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus cereus strain 30048     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1205117..1215293
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L6480_RS06210 (BC30048_1142) clpC 1205448..1208048 (+) 2601 WP_000365403.1 ATP-dependent chaperone ClpB Regulator
  L6480_RS06215 (BC30048_1143) - 1208087..1208269 (-) 183 WP_001211116.1 YjzD family protein -
  L6480_RS06220 (BC30048_1144) - 1208426..1209160 (+) 735 WP_000028712.1 hydrolase -
  L6480_RS06225 (BC30048_1145) - 1209190..1210062 (+) 873 WP_002164601.1 NAD(P)-dependent oxidoreductase -
  L6480_RS06230 (BC30048_1146) comZ 1210117..1210293 (+) 177 WP_001986215.1 ComZ family protein Regulator
  L6480_RS06235 (BC30048_1147) fabH 1210683..1211615 (+) 933 WP_001100547.1 beta-ketoacyl-ACP synthase III -
  L6480_RS06240 (BC30048_1148) fabF 1211647..1212885 (+) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  L6480_RS06245 (BC30048_1149) - 1212992..1213780 (+) 789 WP_000513277.1 DUF2268 domain-containing putative Zn-dependent protease -
  L6480_RS06250 (BC30048_1150) - 1213923..1214669 (+) 747 WP_050252206.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=80438 L6480_RS06230 WP_001986215.1 1210117..1210293(+) (comZ) [Bacillus cereus strain 30048]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=80438 L6480_RS06230 WP_001986215.1 1210117..1210293(+) (comZ) [Bacillus cereus strain 30048]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCAGTGTTAGAGTTGTTAATGAAAGTTATGAACGAGGCCTATGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment