Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   L6438_RS06130 Genome accession   NZ_AP022975
Coordinates   1183405..1183581 (+) Length   58 a.a.
NCBI ID   WP_009879752.1    Uniprot ID   A0A2A8KX43
Organism   Bacillus cereus strain 30040     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1178405..1188581
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L6438_RS06110 (BC30040_1118) clpB 1178742..1181342 (+) 2601 WP_078438291.1 ATP-dependent chaperone ClpB -
  L6438_RS06115 (BC30040_1119) - 1181376..1181558 (-) 183 WP_001211116.1 YjzD family protein -
  L6438_RS06120 (BC30040_1120) - 1181715..1182449 (+) 735 WP_105988986.1 alpha/beta hydrolase -
  L6438_RS06125 (BC30040_1121) - 1182479..1183351 (+) 873 WP_236787815.1 NAD(P)-dependent oxidoreductase -
  L6438_RS06130 (BC30040_1122) comZ 1183405..1183581 (+) 177 WP_009879752.1 ComZ family protein Regulator
  L6438_RS06135 (BC30040_1123) fabH 1183979..1184911 (+) 933 WP_001100539.1 beta-ketoacyl-ACP synthase III -
  L6438_RS06140 (BC30040_1124) fabF 1184943..1186181 (+) 1239 WP_000412652.1 beta-ketoacyl-ACP synthase II -
  L6438_RS06145 (BC30040_1125) - 1186288..1187076 (+) 789 WP_000513290.1 DUF2268 domain-containing putative Zn-dependent protease -
  L6438_RS06150 (BC30040_1126) - 1187217..1187963 (+) 747 WP_000966134.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.69 Da        Isoelectric Point: 4.3010

>NTDB_id=80337 L6438_RS06130 WP_009879752.1 1183405..1183581(+) (comZ) [Bacillus cereus strain 30040]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=80337 L6438_RS06130 WP_009879752.1 1183405..1183581(+) (comZ) [Bacillus cereus strain 30040]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCGCTTGATATGGAGAAAGCTCAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment