Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK/comK1   Type   Regulator
Locus tag   P3U19_RS04710 Genome accession   NZ_CP120128
Coordinates   976121..976690 (-) Length   189 a.a.
NCBI ID   WP_072399160.1    Uniprot ID   -
Organism   Staphylococcus aureus strain Dog049     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 971121..981690
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3U19_RS04690 (P3U19_04690) - 972626..973984 (+) 1359 WP_000021872.1 TrkH family potassium uptake protein -
  P3U19_RS04695 (P3U19_04695) - 974123..975634 (+) 1512 WP_323696111.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  P3U19_RS04710 (P3U19_04710) comK/comK1 976121..976690 (-) 570 WP_072399160.1 competence protein ComK Regulator
  P3U19_RS04715 (P3U19_04715) - 976900..977118 (+) 219 WP_000876826.1 IDEAL domain-containing protein -
  P3U19_RS04720 (P3U19_04720) - 977199..978185 (-) 987 WP_000668823.1 lipoate--protein ligase -
  P3U19_RS04725 (P3U19_04725) - 978384..978560 (+) 177 WP_000214898.1 YkvS family protein -
  P3U19_RS04730 (P3U19_04730) - 978575..979177 (+) 603 WP_001033867.1 type II CAAX prenyl endopeptidase Rce1 family protein -
  P3U19_RS04735 (P3U19_04735) - 979494..979556 (+) 63 WP_228764722.1 hypothetical protein -
  P3U19_RS04740 (P3U19_04740) - 980095..980196 (+) 102 WP_001790623.1 hypothetical protein -
  P3U19_RS04745 (P3U19_04745) - 980206..980478 (+) 273 WP_072399255.1 lactococcin 972 family bacteriocin -

Sequence

Protein


Download         Length: 189 a.a.        Molecular weight: 22617.87 Da        Isoelectric Point: 9.6091

>NTDB_id=803279 P3U19_RS04710 WP_072399160.1 976121..976690(-) (comK/comK1) [Staphylococcus aureus strain Dog049]
MYSQNIYVIRKGDMVIRPAFDDDDQRNGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTYLGKKAETNRITGISSKLPIL
LTPLFPTYFFPTHSDRQNENIWLNMHYIESIKELKNRKCKVTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMIS
KNPDQPIDYNKATLNVFEALTRYSLFEDK

Nucleotide


Download         Length: 570 bp        

>NTDB_id=803279 P3U19_RS04710 WP_072399160.1 976121..976690(-) (comK/comK1) [Staphylococcus aureus strain Dog049]
ATGTATTCTCAAAATATTTATGTGATACGCAAAGGAGACATGGTTATTCGACCAGCATTTGATGATGACGATCAAAGAAA
CGGTAGTGAAATAATTCGGTTTGACAAAACGCGTATTCAAAATCCTTTTAAAGTCCAGAAAATCATTGAACGCTCTTGCA
AATTTTATGGTAATACTTATCTTGGCAAGAAAGCAGAGACAAACCGCATTACTGGCATTTCTAGTAAACTACCTATTTTA
CTAACACCATTATTTCCAACTTATTTTTTCCCAACACATTCTGACAGACAAAATGAAAATATTTGGTTAAATATGCATTA
TATCGAAAGTATTAAAGAATTAAAAAATCGCAAATGTAAAGTGACATTTATTAATAATGAATCAATCATTCTTCATGTTT
CATACCACAGTTTATGGCATCAATATAACAATTCCATTTTTTACTATTACATGGTAGATAAACAATCTCGCATGATATCA
AAAAATCCCGACCAACCAATAGATTATAATAAAGCCACATTGAATGTGTTTGAAGCATTGACACGCTATTCTTTATTTGA
AGATAAATAA

Domains

Predicted by InterproScan.

ComK protein (ComK)

(5-156)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

99.471

100

0.995
  comK/comK1 Staphylococcus aureus N315

99.471

100

0.995