Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | P3T86_RS07095 | Genome accession | NZ_CP120099 |
| Coordinates | 1475524..1476498 (+) | Length | 324 a.a. |
| NCBI ID | WP_108909309.1 | Uniprot ID | - |
| Organism | Staphylococcus nepalensis strain Dog109 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1470524..1481498
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P3T86_RS07060 (P3T86_07060) | rpmG | 1470739..1470888 (+) | 150 | WP_019469354.1 | 50S ribosomal protein L33 | - |
| P3T86_RS07065 (P3T86_07065) | - | 1471032..1471574 (+) | 543 | WP_119487993.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| P3T86_RS07070 (P3T86_07070) | - | 1471586..1473034 (+) | 1449 | WP_096809494.1 | rhomboid family intramembrane serine protease | - |
| P3T86_RS07075 (P3T86_07075) | - | 1473021..1473227 (+) | 207 | WP_103373744.1 | YqgQ family protein | - |
| P3T86_RS07080 (P3T86_07080) | - | 1473527..1474513 (+) | 987 | WP_096809499.1 | glucokinase | - |
| P3T86_RS07085 (P3T86_07085) | - | 1474513..1474839 (+) | 327 | WP_096809501.1 | MTH1187 family thiamine-binding protein | - |
| P3T86_RS07090 (P3T86_07090) | - | 1474839..1475462 (+) | 624 | WP_096809503.1 | MBL fold metallo-hydrolase | - |
| P3T86_RS07095 (P3T86_07095) | comGA | 1475524..1476498 (+) | 975 | WP_108909309.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| P3T86_RS07100 (P3T86_07100) | comGB | 1476470..1477537 (+) | 1068 | WP_232164817.1 | competence type IV pilus assembly protein ComGB | - |
| P3T86_RS07105 (P3T86_07105) | comGC | 1477558..1477875 (+) | 318 | WP_115342135.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| P3T86_RS07110 (P3T86_07110) | comGD | 1477865..1478305 (+) | 441 | WP_323701986.1 | competence type IV pilus minor pilin ComGD | - |
| P3T86_RS07115 (P3T86_07115) | - | 1478286..1478579 (+) | 294 | WP_115342137.1 | hypothetical protein | - |
| P3T86_RS07120 (P3T86_07120) | - | 1478557..1479000 (+) | 444 | WP_323701987.1 | competence type IV pilus minor pilin ComGF | - |
| P3T86_RS07125 (P3T86_07125) | - | 1479178..1479672 (+) | 495 | WP_369967663.1 | shikimate kinase | - |
| P3T86_RS07130 (P3T86_07130) | gcvT | 1479849..1480940 (+) | 1092 | WP_096809520.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37210.44 Da Isoelectric Point: 9.5389
>NTDB_id=802941 P3T86_RS07095 WP_108909309.1 1475524..1476498(+) (comGA) [Staphylococcus nepalensis strain Dog109]
MKLLFKNIFDKAIHENVTDVHFIPNQNKVKIKFRKKAFLVTVETIEINTYKKLLTYMKYQAGLDVSKHNAAQSGRYAYKL
KQLYYLRISTLPLSLGYESCVVRIIPQYFQKTAKIQSLNQLFKLMNKQQGLLLFSGPTGSGKSTLMYQMILHAKEQLNVN
IITVEDPVERLIEGITQVSINEKAGINYANSFKAILRCDPDIILIGEIRDATIAKQVIHASLSGHLVLSTIHSNNCKGAL
CRLLEMGISVQELRQTILSIINQRLIVTSKEERSLIYEQLTREDIQFYFENQLTLPNTFQNLSFKLHEMAKEGEICEETL
NRYI
MKLLFKNIFDKAIHENVTDVHFIPNQNKVKIKFRKKAFLVTVETIEINTYKKLLTYMKYQAGLDVSKHNAAQSGRYAYKL
KQLYYLRISTLPLSLGYESCVVRIIPQYFQKTAKIQSLNQLFKLMNKQQGLLLFSGPTGSGKSTLMYQMILHAKEQLNVN
IITVEDPVERLIEGITQVSINEKAGINYANSFKAILRCDPDIILIGEIRDATIAKQVIHASLSGHLVLSTIHSNNCKGAL
CRLLEMGISVQELRQTILSIINQRLIVTSKEERSLIYEQLTREDIQFYFENQLTLPNTFQNLSFKLHEMAKEGEICEETL
NRYI
Nucleotide
Download Length: 975 bp
>NTDB_id=802941 P3T86_RS07095 WP_108909309.1 1475524..1476498(+) (comGA) [Staphylococcus nepalensis strain Dog109]
TTGAAGTTATTATTTAAAAATATTTTTGACAAGGCAATTCATGAAAATGTTACAGATGTACATTTTATACCAAACCAAAA
TAAAGTAAAAATTAAATTCAGAAAGAAAGCATTTTTAGTTACAGTAGAAACAATAGAAATCAACACTTATAAGAAATTAC
TTACCTATATGAAATATCAAGCAGGATTAGATGTTTCTAAACACAATGCTGCCCAAAGTGGTAGATATGCATATAAATTA
AAACAACTATATTATTTAAGAATTTCTACTTTGCCATTGTCTTTAGGTTATGAGAGTTGTGTAGTTAGGATTATTCCTCA
ATATTTTCAAAAAACAGCAAAAATTCAAAGTCTCAATCAATTATTCAAATTAATGAATAAACAACAAGGTTTACTACTAT
TTAGTGGTCCAACTGGATCAGGAAAAAGCACATTAATGTATCAAATGATTTTACACGCAAAAGAACAATTAAATGTGAAT
ATTATAACAGTTGAAGATCCTGTGGAACGATTAATTGAAGGTATTACACAAGTTTCTATCAATGAAAAGGCAGGTATTAA
TTATGCTAACTCCTTTAAAGCAATTTTAAGATGTGACCCAGATATTATTCTTATAGGAGAAATTAGAGATGCAACTATCG
CTAAACAGGTCATACATGCTAGTTTAAGTGGACATTTAGTGCTTTCAACTATCCACTCTAATAACTGTAAAGGCGCATTA
TGCAGGTTATTAGAAATGGGTATAAGTGTTCAAGAACTACGTCAAACGATCTTAAGTATTATTAATCAACGACTTATCGT
TACATCAAAAGAAGAGCGTTCATTAATATATGAACAACTAACACGAGAAGATATACAATTTTATTTCGAAAACCAGCTTA
CGCTTCCAAACACATTTCAAAATTTATCTTTTAAATTACACGAAATGGCTAAAGAAGGAGAAATTTGTGAAGAAACACTT
AATAGATATATTTAG
TTGAAGTTATTATTTAAAAATATTTTTGACAAGGCAATTCATGAAAATGTTACAGATGTACATTTTATACCAAACCAAAA
TAAAGTAAAAATTAAATTCAGAAAGAAAGCATTTTTAGTTACAGTAGAAACAATAGAAATCAACACTTATAAGAAATTAC
TTACCTATATGAAATATCAAGCAGGATTAGATGTTTCTAAACACAATGCTGCCCAAAGTGGTAGATATGCATATAAATTA
AAACAACTATATTATTTAAGAATTTCTACTTTGCCATTGTCTTTAGGTTATGAGAGTTGTGTAGTTAGGATTATTCCTCA
ATATTTTCAAAAAACAGCAAAAATTCAAAGTCTCAATCAATTATTCAAATTAATGAATAAACAACAAGGTTTACTACTAT
TTAGTGGTCCAACTGGATCAGGAAAAAGCACATTAATGTATCAAATGATTTTACACGCAAAAGAACAATTAAATGTGAAT
ATTATAACAGTTGAAGATCCTGTGGAACGATTAATTGAAGGTATTACACAAGTTTCTATCAATGAAAAGGCAGGTATTAA
TTATGCTAACTCCTTTAAAGCAATTTTAAGATGTGACCCAGATATTATTCTTATAGGAGAAATTAGAGATGCAACTATCG
CTAAACAGGTCATACATGCTAGTTTAAGTGGACATTTAGTGCTTTCAACTATCCACTCTAATAACTGTAAAGGCGCATTA
TGCAGGTTATTAGAAATGGGTATAAGTGTTCAAGAACTACGTCAAACGATCTTAAGTATTATTAATCAACGACTTATCGT
TACATCAAAAGAAGAGCGTTCATTAATATATGAACAACTAACACGAGAAGATATACAATTTTATTTCGAAAACCAGCTTA
CGCTTCCAAACACATTTCAAAATTTATCTTTTAAATTACACGAAATGGCTAAAGAAGGAGAAATTTGTGAAGAAACACTT
AATAGATATATTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
59.877 |
100 |
0.599 |
| comGA | Staphylococcus aureus N315 |
59.877 |
100 |
0.599 |