Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   RI578_RS17555 Genome accession   NZ_CP134203
Coordinates   3823880..3825004 (+) Length   374 a.a.
NCBI ID   WP_121748391.1    Uniprot ID   A0ABP9T9X5
Organism   Streptomyces sp. BB1-1-1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3818880..3830004
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RI578_RS17540 (RI578_17540) - 3819275..3820087 (+) 813 WP_310871951.1 hypothetical protein -
  RI578_RS17545 (RI578_17545) - 3820095..3821921 (-) 1827 WP_310871952.1 BACON domain-containing protein -
  RI578_RS17550 (RI578_17550) radA 3822389..3823798 (+) 1410 WP_121748392.1 DNA repair protein RadA Machinery gene
  RI578_RS17555 (RI578_17555) disA 3823880..3825004 (+) 1125 WP_121748391.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  RI578_RS17560 (RI578_17560) - 3825092..3825940 (-) 849 WP_310871953.1 hypothetical protein -
  RI578_RS17565 (RI578_17565) - 3826115..3826795 (+) 681 WP_310871954.1 phosphatase PAP2 family protein -
  RI578_RS17570 (RI578_17570) - 3826809..3827480 (-) 672 WP_121748388.1 response regulator transcription factor -
  RI578_RS17575 (RI578_17575) - 3827477..3829171 (-) 1695 WP_310871955.1 histidine kinase -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40101.90 Da        Isoelectric Point: 5.0092

>NTDB_id=802672 RI578_RS17555 WP_121748391.1 3823880..3825004(+) (disA) [Streptomyces sp. BB1-1-1]
MAANDRAAAPGKSGGSAGADGLMRASLSAVAPGTLLRDGLERVLRGNTGGLMVLGSDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLLPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVEEALAELDKLSHAELLELSTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=802672 RI578_RS17555 WP_121748391.1 3823880..3825004(+) (disA) [Streptomyces sp. BB1-1-1]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGTGCCGGTGCCGATGGCCTGATGCGCGCCTCGCT
GAGCGCGGTGGCGCCCGGCACGCTCCTTCGGGACGGCCTGGAACGGGTCCTTCGCGGCAATACCGGCGGCCTGATGGTGC
TGGGCTCCGACAAGACCGTCGAGTCGATGTGCACCGGCGGTTTCGTACTGGACGTCGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTGTCCTCGGACCTGTCCAAGATCCTGCGGGCCGGCGTGCAGCTGCTTCC
GGACCCGACCATCCCCACGGAGGAAACCGGCACCCGGCACCGTACGGCGGACCGGGTCAGCAAGCAGGTCGGCTTCCCCG
TCGTCTCCGTGTCGCAGTCGATGCGGCTGATCGCGCTCTACGTCGACGGCCAGCGGCGTGTGCTGGAGGACTCCGCGGCG
ATCCTGTCCCGCGCCAACCAGGCCCTGGCGACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTGACGGTGCGGGACGTCTCCGCGGTCGCGCAGCGGCTGGAGATGGTGCGCCGCATCG
CGACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACGGACGGACGGCTGCTGGCGCTCCAGCTGGACGAGTTGATCGCC
GGCGTGGAGCCCGAGCGCGAGCTGGTCGTGCGGGACTACGTGCCCGAGCCGACCGCCAAGCGCTCCCGCACGGTCGAGGA
GGCGCTCGCCGAGCTGGACAAGCTCAGCCACGCCGAGCTGCTCGAACTGTCCACGGTGGCCCGTGCGTTGGGCTACACCG
GCTCTCCGGAGACCCTGGACTCGGCGGTGTCGCCGCGCGGCTTCCGGCTGCTGGCGAAGGTTCCGCGGCTGCCCGGCGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCCGCCAGCGTGGACGACCTCCAGACGGTGGA
CGGCGTCGGCGAGGCGCGGGCGCGCAGCGTGCGGGAGGGTCTGTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTGA

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.983

96.524

0.444