Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   RIU97_RS17770 Genome accession   NZ_CP134201
Coordinates   3983924..3985048 (+) Length   374 a.a.
NCBI ID   WP_030720549.1    Uniprot ID   -
Organism   Streptomyces sp. 147326     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3978924..3990048
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RIU97_RS17755 (RIU97_17720) - 3979426..3980292 (+) 867 WP_404957890.1 hypothetical protein -
  RIU97_RS17760 (RIU97_17725) - 3980366..3982156 (-) 1791 WP_404957892.1 BACON domain-containing protein -
  RIU97_RS17765 (RIU97_17730) radA/sms 3982338..3983750 (+) 1413 WP_383566573.1 DNA repair protein RadA Machinery gene
  RIU97_RS17770 (RIU97_17735) disA 3983924..3985048 (+) 1125 WP_030720549.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  RIU97_RS17775 (RIU97_17740) - 3985143..3985946 (-) 804 WP_404957895.1 hypothetical protein -
  RIU97_RS17780 (RIU97_17745) - 3986107..3986334 (+) 228 WP_404957897.1 hypothetical protein -
  RIU97_RS17785 (RIU97_17750) - 3986337..3986552 (+) 216 WP_404957900.1 phosphatase PAP2 family protein -
  RIU97_RS17790 (RIU97_17755) - 3986576..3987493 (+) 918 WP_404957902.1 A/G-specific adenine glycosylase -
  RIU97_RS17795 (RIU97_17760) - 3987824..3988384 (+) 561 WP_319727094.1 SigE family RNA polymerase sigma factor -
  RIU97_RS17800 (RIU97_17765) - 3988372..3989067 (+) 696 WP_404957905.1 hypothetical protein -
  RIU97_RS17805 (RIU97_17770) cseB 3989097..3989810 (+) 714 WP_327415609.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40352.32 Da        Isoelectric Point: 4.9472

>NTDB_id=802481 RIU97_RS17770 WP_030720549.1 3983924..3985048(+) (disA) [Streptomyces sp. 147326]
MAAKDGAAASGKSGASSKQEAMMRASLSAVAPGQPLRDGLERIVRGNTGGLLVLGMDKSVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVDEALAELDALTHPELLELAIVAKALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=802481 RIU97_RS17770 WP_030720549.1 3983924..3985048(+) (disA) [Streptomyces sp. 147326]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGCAAGTCGGGCGCGAGCTCCAAGCAGGAGGCCATGATGCGCGCCTCGCT
GAGCGCGGTCGCACCTGGTCAGCCGCTGCGTGACGGCTTGGAGCGGATCGTCCGCGGCAACACCGGCGGGCTCCTCGTCC
TCGGCATGGACAAGTCCGTCGAGGCCATGTGCACCGGTGGTTTCGTCCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTCATCCTCGACAAGGACATCACCAAGATCCTGCGCGCCGGTGTGCAGCTGGTGCC
GGACGCGTCGATCCCGACGGAGGAGACCGGTACGCGTCACCGCACGGCGGACCGCGTCTCCAAGCAGTGCGGCTTCCCGG
TGGTCTCCGTCTCCCAGTCGATGCGGCTCATCGCGCTGTACGTGGACGGGGAGCGGCGGGTCCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGGGCGAACCAGGCGCTGGCCACACTGGAGCGGTACAAGCTGCGCCTCGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTCACGGTCCGCGACGTGACGGCGGTCGCGCAGCGGCTGGAAATGGTCCGCCGGATCG
CGACCGAGATCGCCGAGTACGTGGTCGAACTGGGCACGGACGGGCGACTGCTGTCGCTGCAGCTGGACGAGCTGACGGTC
GGCATCGAGCAGGAGCGGGAGCTCGTCATCCGGGACTACGTGCCGGAGCCGACGGCGAAGCGTTCCCGCACGGTGGACGA
GGCGCTGGCGGAACTGGACGCGCTGACGCATCCGGAACTGCTGGAGCTGGCGATCGTGGCGAAGGCGCTGGGGTACACGG
GCTCGCCGGAGACCCTGGACTCGGCGGTGTCGCCCCGCGGGTACCGGCTGCTGGCGAAGGTGCCGAGGCTGCCGGGAGCG
ATCATCGAGCGGCTCGTGGAGCACTTCGGGGGCCTGCAGAAGCTGCTCGCTGCCAGCGTGGACGACCTGCAGACGGTCGA
CGGGGTCGGCGAGGCGCGTGCGCGCAGCGTCCGCGAGGGCCTGTCCCGCCTGGCGGAGTCCTCGATCCTCGAGCGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.983

96.524

0.444