Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   P3F89_RS21045 Genome accession   NZ_CP119875
Coordinates   4054304..4054987 (-) Length   227 a.a.
NCBI ID   WP_000350710.1    Uniprot ID   Q81TR3
Organism   Bacillus tropicus strain T36S-23     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 4049304..4059987
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3F89_RS21030 (P3F89_20995) pepF 4049485..4051311 (-) 1827 WP_002194685.1 oligoendopeptidase F Regulator
  P3F89_RS21035 (P3F89_21000) - 4051362..4052606 (-) 1245 WP_033691187.1 competence protein CoiA -
  P3F89_RS21040 (P3F89_21005) - 4052687..4054231 (-) 1545 WP_000799204.1 cardiolipin synthase -
  P3F89_RS21045 (P3F89_21010) mecA 4054304..4054987 (-) 684 WP_000350710.1 adaptor protein MecA Regulator
  P3F89_RS21050 (P3F89_21015) - 4055328..4056002 (+) 675 WP_002194680.1 TerC family protein -
  P3F89_RS21055 (P3F89_21020) spx 4056052..4056447 (-) 396 WP_000258267.1 transcriptional regulator Spx -
  P3F89_RS21060 (P3F89_21025) - 4057041..4057244 (+) 204 WP_033691184.1 hypothetical protein -
  P3F89_RS21065 (P3F89_21030) - 4057273..4058919 (-) 1647 WP_098229479.1 peptide ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 26966.00 Da        Isoelectric Point: 3.9822

>NTDB_id=801222 P3F89_RS21045 WP_000350710.1 4054304..4054987(-) (mecA) [Bacillus tropicus strain T36S-23]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQAGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=801222 P3F89_RS21045 WP_000350710.1 4054304..4054987(-) (mecA) [Bacillus tropicus strain T36S-23]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGACAGAGGCTTTAATCG
TGAGGAAATTTGGTATGACCGCGAAAGAAGCGAAGAGCTCTTTTGGGAAATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCGGAACTT
TCAAAGGATGGACAAAAGCTAGAACTACCAATAGGTGTAGATAAAATTATAGACATTCCTTTAGATGAAGGCATTGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAGCAGGTACAAACTTTAACGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCCTTAAGCCACCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATTGACCGCATTTTAAG
TATTGTTTTAGAATACGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGGAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACAATTCGCAATAATTTTCCTGCTAAAACGTAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q81TR3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.14

100

0.564