Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   P3F89_RS06495 Genome accession   NZ_CP119875
Coordinates   1235841..1236635 (+) Length   264 a.a.
NCBI ID   WP_033686380.1    Uniprot ID   A0A4Y6EYG5
Organism   Bacillus tropicus strain T36S-23     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1230841..1241635
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3F89_RS06480 (P3F89_06475) argR 1231680..1232129 (+) 450 WP_001032581.1 arginine repressor ArgR -
  P3F89_RS06485 (P3F89_06480) recN 1232397..1234136 (+) 1740 WP_000947747.1 DNA repair protein RecN Machinery gene
  P3F89_RS06490 (P3F89_06485) spoIVB 1234255..1235553 (+) 1299 WP_098524035.1 SpoIVB peptidase -
  P3F89_RS06495 (P3F89_06490) spo0A 1235841..1236635 (+) 795 WP_033686380.1 sporulation transcription factor Spo0A Regulator
  P3F89_RS06500 (P3F89_06495) - 1236923..1238446 (+) 1524 WP_098524034.1 glycosyltransferase family 39 protein -
  P3F89_RS06505 (P3F89_06500) - 1238815..1240233 (+) 1419 WP_001979355.1 hypothetical protein -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29454.20 Da        Isoelectric Point: 7.4718

>NTDB_id=801207 P3F89_RS06495 WP_033686380.1 1235841..1236635(+) (spo0A) [Bacillus tropicus strain T36S-23]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=801207 P3F89_RS06495 WP_033686380.1 1235841..1236635(+) (spo0A) [Bacillus tropicus strain T36S-23]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGTTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATTGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTTG
TTTTAGATATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGTCAAGAAGATGTGACGAAAAAAGCGGTTGACTTAGGTGCTTCCTATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAGGCGAACGCTACCATTAAACGTCCAC
TTCCATCTTTCCGTTCAGCAACGACAATAGATGGAAAGCCGAAAAATTTAGATGCGAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGATATATGTATTTAAGAGAAGCAATCTCTATGGTGTACAACGATATCGAATTACT
TGGATCTATTACAAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGTCGTGTCGAGCGTGCAATCC
GTCATGCAATTGAAGTAGCGTGGAGTCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCTGAGTTTATTGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4Y6EYG5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818