Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   P3S72_RS28545 Genome accession   NZ_CP119772
Coordinates   6148586..6148993 (-) Length   135 a.a.
NCBI ID   WP_010564379.1    Uniprot ID   A0A7Y8D5M8
Organism   Pseudomonas sp. D3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6143586..6153993
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3S72_RS28530 (P3S72_28525) - 6145583..6147634 (-) 2052 WP_276195286.1 methyl-accepting chemotaxis protein -
  P3S72_RS28535 (P3S72_28530) - 6147631..6148155 (-) 525 WP_276195287.1 chemotaxis protein CheW -
  P3S72_RS28540 (P3S72_28535) pilH 6148168..6148539 (-) 372 WP_276195288.1 twitching motility response regulator PilH -
  P3S72_RS28545 (P3S72_28540) pilG 6148586..6148993 (-) 408 WP_010564379.1 twitching motility response regulator PilG Regulator
  P3S72_RS28550 (P3S72_28545) gshB 6149233..6150186 (+) 954 WP_253399915.1 glutathione synthase -
  P3S72_RS28555 (P3S72_28550) - 6150264..6151169 (+) 906 WP_253399917.1 energy transducer TonB -
  P3S72_RS28560 (P3S72_28555) - 6151367..6151936 (+) 570 WP_276195289.1 YqgE/AlgH family protein -
  P3S72_RS28565 (P3S72_28560) ruvX 6151936..6152373 (+) 438 WP_276195290.1 Holliday junction resolvase RuvX -
  P3S72_RS28570 (P3S72_28565) pyrR 6152458..6152964 (+) 507 WP_276195291.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  P3S72_RS28575 (P3S72_28570) - 6152989..6153993 (+) 1005 WP_276195292.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14906.40 Da        Isoelectric Point: 7.3842

>NTDB_id=801122 P3S72_RS28545 WP_010564379.1 6148586..6148993(-) (pilG) [Pseudomonas sp. D3]
MEQHSNALRVMVIDDSKTIRRTAETLLKNVGCDVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=801122 P3S72_RS28545 WP_010564379.1 6148586..6148993(-) (pilG) [Pseudomonas sp. D3]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAGACCCTGTT
GAAGAACGTGGGGTGCGATGTCATCACGGCCATCGATGGTTTCGATGCCCTGGCCCGGATTGTGGATCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACTTGCGCCCTGGTGAAGAACAACCCGGCGTTCAAG
TCGATCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGGGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGTGCGATCAAGGCCTACGTGCCGGGTTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Y8D5M8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70.4

92.593

0.652
  vicR Streptococcus mutans UA159

38.889

93.333

0.363