Detailed information NTG0800740

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: P3K41_RS07455
• Genome accession: NZ_CP119713
• Coordinates: 1575536..1576033 (-)
• Length: 165 a.a.
• NCBI ID: WP_404968819.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain CUVET17-948
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	1574380..1575552	1575536..1576033	flank	-16

Gene organization within MGE regions

Location: 1574380..1576033

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P3K41_RS07450 (P3K41_07430)	-	1574380..1575552 (+)	1173	WP_000195429.1	IS256-like element IS256 family transposase	-
P3K41_RS07455 (P3K41_07435)	comGF	1575536..1576033 (-)	498	WP_404968819.1	competence type IV pilus minor pilin ComGF	Machinery gene

Sequence

Protein

• Length: 165 a.a.
• Molecular weight: 19355.06 Da
• Isoelectric Point: 10.0574

>NTDB_id=800740 P3K41_RS07455 WP_404968819.1 1575536..1576033(-) (comGF) [Staphylococcus aureus strain CUVET17-948]
MILSKVTNKFVLFQKIPLLIKRHVYSINVKAFSLIEMLVAMMVISITLLIVPDLIRLSKTFLIESRELTTVDFEFFSRDI
LEDFKGVDRNDIEIRQQRIILHKGEEMIEYKLINNKIIKVVNDRGNITLINNVTAFTANIYYKSVKSRLLCKMLYNVFTI
STYQN

Nucleotide

• Length: 498 bp

>NTDB_id=800740 P3K41_RS07455 WP_404968819.1 1575536..1576033(-) (comGF) [Staphylococcus aureus strain CUVET17-948]
ATGATATTAAGCAAAGTGACCAACAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTAT
TAATGTCAAAGCTTTTTCGCTTATTGAAATGTTAGTAGCGATGATGGTTATAAGCATAACTTTACTAATTGTTCCAGACT
TAATTAGACTTAGCAAAACTTTTCTAATTGAAAGTAGGGAATTAACAACTGTAGATTTCGAATTTTTCTCAAGAGATATT
CTAGAGGATTTTAAAGGTGTAGATAGAAACGATATTGAAATTAGGCAACAGCGTATCATTTTACATAAAGGTGAAGAAAT
GATCGAATACAAATTAATAAATAATAAAATTATTAAAGTTGTAAATGACAGAGGAAATATAACATTGATTAATAATGTTA
CAGCATTTACTGCAAATATCTACTATAAATCAGTCAAGTCCAGACTCCTGTGTAAAATGCTATACAATGTTTTTACCATT
TCTACTTATCAAAATTGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (28-51)

• Putative Competence protein ComGF (ComGF) (68-140)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Staphylococcus aureus MW2	89.024	99.394	0.885
comGF	Staphylococcus aureus N315	97.241	87.879	0.855