Detailed information    

insolico Bioinformatically predicted

Overview


Name   comK/comK1   Type   Regulator
Locus tag   P3K47_RS04760 Genome accession   NZ_CP119707
Coordinates   999182..999751 (-) Length   189 a.a.
NCBI ID   WP_000287265.1    Uniprot ID   A0A7U7EXU5
Organism   Staphylococcus aureus strain CUVET17-1749     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 994182..1004751
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3K47_RS04740 (P3K47_04735) - 995685..997043 (+) 1359 WP_000021872.1 TrkH family potassium uptake protein -
  P3K47_RS04745 (P3K47_04740) - 997182..998693 (+) 1512 WP_000414168.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  P3K47_RS04760 (P3K47_04755) comK/comK1 999182..999751 (-) 570 WP_000287265.1 competence protein ComK Regulator
  P3K47_RS04765 (P3K47_04760) - 999961..1000179 (+) 219 WP_000876826.1 IDEAL domain-containing protein -
  P3K47_RS04770 (P3K47_04765) - 1000260..1001246 (-) 987 WP_000668814.1 lipoate--protein ligase -
  P3K47_RS04775 (P3K47_04770) - 1001445..1001621 (+) 177 WP_000214898.1 YkvS family protein -
  P3K47_RS04780 (P3K47_04775) - 1001636..1002238 (+) 603 WP_001033867.1 type II CAAX prenyl endopeptidase Rce1 family protein -
  P3K47_RS04785 - 1002553..1002615 (+) 63 WP_240785570.1 putative holin-like toxin -
  P3K47_RS04790 (P3K47_04780) - 1003250..1003534 (+) 285 WP_000790905.1 lactococcin 972 family bacteriocin -

Sequence


Protein


Download         Length: 189 a.a.        Molecular weight: 22601.83 Da        Isoelectric Point: 9.6091

>NTDB_id=800649 P3K47_RS04760 WP_000287265.1 999182..999751(-) (comK/comK1) [Staphylococcus aureus strain CUVET17-1749]
MYSQNIYVIRKGDMVIRPAFDDDDQRNGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTYLGKKAETNRITGISSKPPIL
LTPLFPTYFFPTHSDRQNENIWLNMHYIESIKELKNRKCKVTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMIS
KNPDQPIDYNKATLNVFEALTRYSLFEDK

Nucleotide


Download         Length: 570 bp        

>NTDB_id=800649 P3K47_RS04760 WP_000287265.1 999182..999751(-) (comK/comK1) [Staphylococcus aureus strain CUVET17-1749]
ATGTATTCTCAAAATATTTATGTGATACGCAAAGGAGACATGGTTATTCGACCAGCATTTGATGATGACGATCAAAGAAA
TGGTAGTGAAATAATTCGGTTTGACAAAACGCGTATTCAAAATCCTTTTAAAGTCCAGAAAATCATTGAACGCTCTTGCA
AATTTTATGGTAATACTTATCTTGGCAAGAAAGCAGAGACAAACCGCATTACTGGCATTTCTAGTAAACCACCTATTTTA
CTAACACCATTATTTCCAACTTATTTTTTCCCAACACATTCTGACAGACAAAATGAAAATATTTGGTTAAATATGCATTA
TATCGAAAGTATCAAAGAATTAAAAAATCGTAAATGTAAAGTGACATTTATTAATAATGAATCAATCATTCTTCATGTTT
CATACCACAGTTTATGGCATCAATATAACAATTCCATTTTTTACTATTACATGGTAGATAAACAATCTCGCATGATATCA
AAAAATCCCGACCAACCAATAGATTATAATAAAGCCACATTGAATGTGTTTGAAGCATTGACACGCTATTCTTTATTTGA
AGATAAATAA

Domains


Predicted by InterproScan.

(5-156)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7U7EXU5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

100

100

1

  comK/comK1 Staphylococcus aureus N315

100

100

1