Detailed information NTG0800439

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: RGU79_RS16235
• Genome accession: NZ_CP133717
• Coordinates: 3366058..3367371 (-)
• Length: 437 a.a.
• NCBI ID: WP_001289251.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain Ab1
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3361058..3372371

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RGU79_RS16220 (RGU79_16245)	-	3362948..3364474 (+)	1527	WP_000207467.1	fumarate hydratase	-
RGU79_RS16225 (RGU79_16250)	-	3364616..3365170 (+)	555	WP_000155519.1	DUF2059 domain-containing protein	-
RGU79_RS16230 (RGU79_16255)	-	3365195..3365911 (-)	717	WP_001269736.1	DUF2846 domain-containing protein	-
RGU79_RS16235 (RGU79_16260)	clpX	3366058..3367371 (-)	1314	WP_001289251.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
RGU79_RS16240 (RGU79_16265)	clpP	3367473..3368078 (-)	606	WP_000289452.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	-
RGU79_RS16245 (RGU79_16270)	tig	3368271..3369605 (-)	1335	WP_086262392.1	trigger factor	-
RGU79_RS16250 (RGU79_16275)	-	3370020..3372251 (+)	2232	WP_025464903.1	TonB-dependent siderophore receptor	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 48112.90 Da
• Isoelectric Point: 4.9985

>NTDB_id=800439 RGU79_RS16235 WP_001289251.1 3366058..3367371(-) (clpX) [Acinetobacter baumannii strain Ab1]
MSEHPQGQKHCSFCGKTQSEVGKLIAGEDAYICNECVDVCLDLVQTSQQVEAGDWASKALPKPHEIRAALDQYVIGQDLA
KKTLSVAVYNHYKRLKVGQSGHVSKDVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENI
VQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGGRKHPQQEFIQIDTS
NILFICGGAFAGLEKIVQQRQEKGGIGFTADVKNKDETKKLAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEAL
MQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDLPSRTDVGTVFINEAV
INGEAEPVYKSERQPKETVTHESVAKADLKVIDSKSA

Nucleotide

• Length: 1314 bp

>NTDB_id=800439 RGU79_RS16235 WP_001289251.1 3366058..3367371(-) (clpX) [Acinetobacter baumannii strain Ab1]
ATGTCCGAACATCCTCAAGGACAAAAACATTGTTCATTTTGCGGTAAAACGCAGTCTGAAGTCGGGAAACTGATTGCGGG
CGAGGACGCATATATTTGTAATGAGTGTGTAGATGTCTGCTTAGACCTTGTACAAACCAGCCAACAGGTTGAAGCAGGTG
ACTGGGCGAGCAAGGCATTGCCAAAACCACATGAAATACGTGCTGCGCTTGATCAATATGTAATTGGTCAGGATCTTGCC
AAAAAGACATTATCTGTTGCCGTTTATAACCATTATAAGCGTTTGAAAGTCGGGCAATCTGGTCATGTGTCTAAAGATGT
GGAAATTGCTAAAAGTAACATTCTACTGATTGGGCCTACCGGTTCAGGTAAAACATTACTTGCTCAAACATTGGCTCGTT
TGTTAGATGTGCCGTTTGCAATGGCAGATGCGACTACTTTGACTGAAGCGGGTTATGTTGGCGAAGACGTTGAAAATATC
GTACAAAAGCTTTTGCAAAAAGCAGATTACGATGTAGAAAAAGCTCAAAAGGGCATTATCTACATTGATGAAATCGACAA
GATTACACGTAAATCTGAAAATCCGTCGATTACTCGTGACGTGTCTGGTGAAGGTGTACAACAAGCTTTGCTTAAGATGA
TTGAAGGTACTGTAGCCTCAATTCCACCACAAGGTGGACGTAAGCATCCACAGCAAGAGTTCATTCAAATTGATACCTCA
AATATTCTATTTATTTGTGGTGGTGCGTTTGCTGGACTGGAAAAAATTGTACAACAGCGTCAAGAGAAAGGCGGAATTGG
CTTTACAGCTGATGTTAAAAACAAAGATGAAACCAAAAAACTTGCTGAATTATTCCGTCAAGTTGAGCCAACTGATTTAG
TTAAATTTGGTTTAATTCCAGAATTCATTGGCCGTTTACCAGTGATTGCAACGCTTGAAGAGCTTGATGAAGAAGCGTTA
ATGCAAATTTTGACTGAACCGAAAAATGCATTAACTCGTCAGTATCAATACCTGTTCAATATGGAAAATGTTGACCTCGT
ATTTGAAGATTCAGCTTTACGTGCAGTGGCTAAGCGTGCGCTTGAGCGTAATACTGGAGCTCGTGGCCTACGTTCGATTT
TGGAAAATGTTCTACTTGAAACGATGTATGACTTGCCAAGCCGTACAGATGTAGGAACAGTTTTCATTAATGAAGCAGTT
ATTAATGGTGAAGCTGAACCTGTCTACAAGTCAGAACGTCAGCCTAAAGAAACTGTAACACATGAAAGTGTTGCTAAGGC
AGATTTAAAAGTAATTGATTCGAAGTCTGCTTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (9-45)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (315-390)

• AAA domain (Cdc48 subfamily) (AAA_2) (111-309)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	59.453	91.991	0.547
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.426	92.449	0.531