Detailed information NTG0800360

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: RGU78_RS15795
• Genome accession: NZ_CP133712
• Coordinates: 3293915..3295228 (-)
• Length: 437 a.a.
• NCBI ID: WP_001289251.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain CRAb1
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3288915..3300228

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RGU78_RS15780 (RGU78_15805)	-	3290805..3292331 (+)	1527	WP_000207467.1	fumarate hydratase	-
RGU78_RS15785 (RGU78_15810)	-	3292473..3293027 (+)	555	WP_000155519.1	DUF2059 domain-containing protein	-
RGU78_RS15790 (RGU78_15815)	-	3293052..3293768 (-)	717	WP_001269736.1	DUF2846 domain-containing protein	-
RGU78_RS15795 (RGU78_15820)	clpX	3293915..3295228 (-)	1314	WP_001289251.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
RGU78_RS15800 (RGU78_15825)	clpP	3295330..3295935 (-)	606	WP_000289452.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	-
RGU78_RS15805 (RGU78_15830)	tig	3296128..3297462 (-)	1335	WP_086262392.1	trigger factor	-
RGU78_RS15810 (RGU78_15835)	-	3297877..3300108 (+)	2232	WP_025464903.1	TonB-dependent siderophore receptor	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 48112.90 Da
• Isoelectric Point: 4.9985

>NTDB_id=800360 RGU78_RS15795 WP_001289251.1 3293915..3295228(-) (clpX) [Acinetobacter baumannii strain CRAb1]
MSEHPQGQKHCSFCGKTQSEVGKLIAGEDAYICNECVDVCLDLVQTSQQVEAGDWASKALPKPHEIRAALDQYVIGQDLA
KKTLSVAVYNHYKRLKVGQSGHVSKDVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENI
VQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGGRKHPQQEFIQIDTS
NILFICGGAFAGLEKIVQQRQEKGGIGFTADVKNKDETKKLAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEAL
MQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDLPSRTDVGTVFINEAV
INGEAEPVYKSERQPKETVTHESVAKADLKVIDSKSA

Nucleotide

• Length: 1314 bp

>NTDB_id=800360 RGU78_RS15795 WP_001289251.1 3293915..3295228(-) (clpX) [Acinetobacter baumannii strain CRAb1]
ATGTCCGAACATCCTCAAGGACAAAAACATTGTTCATTTTGCGGTAAAACGCAGTCTGAAGTCGGGAAACTGATTGCGGG
CGAGGACGCATATATTTGTAATGAGTGTGTAGATGTCTGCTTAGACCTTGTACAAACCAGCCAACAGGTTGAAGCAGGTG
ACTGGGCGAGCAAGGCATTGCCAAAACCACATGAAATACGTGCTGCGCTTGATCAATATGTAATTGGTCAGGATCTTGCC
AAAAAGACATTATCTGTTGCCGTTTATAACCATTATAAGCGTTTGAAAGTCGGGCAATCTGGTCATGTGTCTAAAGATGT
GGAAATTGCTAAAAGTAACATTCTACTGATTGGGCCTACCGGTTCAGGTAAAACATTACTTGCTCAAACATTGGCTCGTT
TGTTAGATGTGCCGTTTGCAATGGCAGATGCGACTACTTTGACTGAAGCGGGTTATGTTGGCGAAGACGTTGAAAATATC
GTACAAAAGCTTTTGCAAAAAGCAGATTACGATGTAGAAAAAGCTCAAAAGGGCATTATCTACATTGATGAAATCGACAA
GATTACACGTAAATCTGAAAATCCGTCGATTACTCGTGACGTGTCTGGTGAAGGTGTACAACAAGCTTTGCTTAAGATGA
TTGAAGGTACTGTAGCCTCAATTCCACCACAAGGTGGACGTAAGCATCCACAGCAAGAGTTCATTCAAATTGATACCTCA
AATATTCTATTTATTTGTGGTGGTGCGTTTGCTGGACTGGAAAAAATTGTACAACAGCGTCAAGAGAAAGGCGGAATTGG
CTTTACAGCTGATGTTAAAAACAAAGATGAAACCAAAAAACTTGCTGAATTATTCCGTCAAGTTGAGCCAACTGATTTAG
TTAAATTTGGTTTAATTCCAGAATTCATTGGCCGTTTACCAGTGATTGCAACGCTTGAAGAGCTTGATGAAGAAGCGTTA
ATGCAAATTTTGACTGAACCGAAAAATGCATTAACTCGTCAGTATCAATACCTGTTCAATATGGAAAATGTTGACCTCGT
ATTTGAAGATTCAGCTTTACGTGCAGTGGCTAAGCGTGCGCTTGAGCGTAATACTGGAGCTCGTGGCCTACGTTCGATTT
TGGAAAATGTTCTACTTGAAACGATGTATGACTTGCCAAGCCGTACAGATGTAGGAACAGTTTTCATTAATGAAGCAGTT
ATTAATGGTGAAGCTGAACCTGTCTACAAGTCAGAACGTCAGCCTAAAGAAACTGTAACACATGAAAGTGTTGCTAAGGC
AGATTTAAAAGTAATTGATTCGAAGTCTGCTTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (9-45)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (315-390)

• AAA domain (Cdc48 subfamily) (AAA_2) (111-309)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	59.453	91.991	0.547
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.426	92.449	0.531