Detailed information NTG0800281

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: RGU80_RS16645
• Genome accession: NZ_CP133706
• Coordinates: 3436186..3437499 (-)
• Length: 437 a.a.
• NCBI ID: WP_001289251.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain CRAb2
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3431186..3442499

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RGU80_RS16630 (RGU80_16660)	-	3433076..3434602 (+)	1527	WP_000207467.1	fumarate hydratase	-
RGU80_RS16635 (RGU80_16665)	-	3434744..3435298 (+)	555	WP_000155519.1	DUF2059 domain-containing protein	-
RGU80_RS16640 (RGU80_16670)	-	3435323..3436039 (-)	717	WP_001269736.1	DUF2846 domain-containing protein	-
RGU80_RS16645 (RGU80_16675)	clpX	3436186..3437499 (-)	1314	WP_001289251.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
RGU80_RS16650 (RGU80_16680)	clpP	3437601..3438206 (-)	606	WP_000289452.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	-
RGU80_RS16655 (RGU80_16685)	tig	3438399..3439733 (-)	1335	WP_001198432.1	trigger factor	-
RGU80_RS16660 (RGU80_16690)	-	3440148..3442379 (+)	2232	WP_025464903.1	TonB-dependent siderophore receptor	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 48112.90 Da
• Isoelectric Point: 4.9985

>NTDB_id=800281 RGU80_RS16645 WP_001289251.1 3436186..3437499(-) (clpX) [Acinetobacter baumannii strain CRAb2]
MSEHPQGQKHCSFCGKTQSEVGKLIAGEDAYICNECVDVCLDLVQTSQQVEAGDWASKALPKPHEIRAALDQYVIGQDLA
KKTLSVAVYNHYKRLKVGQSGHVSKDVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENI
VQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGGRKHPQQEFIQIDTS
NILFICGGAFAGLEKIVQQRQEKGGIGFTADVKNKDETKKLAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEAL
MQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDLPSRTDVGTVFINEAV
INGEAEPVYKSERQPKETVTHESVAKADLKVIDSKSA

Nucleotide

• Length: 1314 bp

>NTDB_id=800281 RGU80_RS16645 WP_001289251.1 3436186..3437499(-) (clpX) [Acinetobacter baumannii strain CRAb2]
ATGTCCGAACATCCTCAAGGACAAAAACATTGTTCATTTTGCGGTAAAACGCAGTCTGAAGTCGGGAAACTGATTGCGGG
CGAGGACGCATATATTTGTAATGAGTGTGTAGATGTCTGCTTAGACCTTGTACAAACCAGCCAACAGGTTGAAGCAGGTG
ACTGGGCGAGCAAGGCATTGCCAAAACCACATGAAATACGTGCTGCGCTTGATCAATATGTAATTGGTCAGGATCTTGCC
AAAAAGACATTATCTGTTGCCGTTTATAACCATTATAAGCGTTTGAAAGTCGGGCAATCTGGTCATGTGTCTAAAGATGT
GGAAATTGCTAAAAGTAACATTCTACTGATTGGGCCTACCGGTTCAGGTAAAACATTACTTGCTCAAACATTGGCTCGTT
TGTTAGATGTGCCGTTTGCAATGGCAGATGCGACTACTTTGACTGAAGCGGGTTATGTTGGCGAAGACGTTGAAAATATC
GTACAAAAGCTTTTGCAAAAAGCAGATTACGATGTAGAAAAAGCTCAAAAGGGCATTATCTACATTGATGAAATCGACAA
GATTACACGTAAATCTGAAAATCCGTCGATTACTCGTGACGTGTCTGGTGAAGGTGTACAACAAGCTTTGCTTAAGATGA
TTGAAGGTACTGTAGCCTCAATTCCACCACAAGGTGGACGTAAGCATCCACAGCAAGAGTTCATTCAAATTGATACCTCA
AATATTCTATTTATTTGTGGTGGTGCGTTTGCTGGACTGGAAAAAATTGTACAACAGCGTCAAGAGAAAGGCGGAATTGG
CTTTACAGCTGATGTTAAAAACAAAGATGAAACCAAAAAACTTGCTGAATTATTCCGTCAAGTTGAGCCAACTGATTTAG
TTAAATTTGGTTTAATTCCAGAATTCATTGGCCGTTTACCAGTGATTGCAACGCTTGAAGAGCTTGATGAAGAAGCGTTA
ATGCAAATTTTGACTGAACCGAAAAATGCATTAACTCGTCAGTATCAATACCTGTTCAATATGGAAAATGTTGACCTCGT
ATTTGAAGATTCAGCTTTACGTGCAGTGGCTAAGCGTGCGCTTGAGCGTAATACTGGAGCTCGTGGCCTACGTTCGATTT
TGGAAAATGTTCTACTTGAAACGATGTATGACTTGCCAAGCCGTACAGATGTAGGAACAGTTTTCATTAATGAAGCAGTT
ATTAATGGTGAAGCTGAACCTGTCTACAAGTCAGAACGTCAGCCTAAAGAAACTGTAACACATGAAAGTGTTGCTAAGGC
AGATTTAAAAGTAATTGATTCGAAGTCTGCTTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (9-45)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (315-390)

• AAA domain (Cdc48 subfamily) (AAA_2) (111-309)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	59.453	91.991	0.547
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.426	92.449	0.531