Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   P1J77_RS05650 Genome accession   NZ_CP119597
Coordinates   1166493..1167302 (-) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 1039     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1161493..1172302
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P1J77_RS05640 (P1J77_05640) smc 1161818..1165357 (-) 3540 WP_136116246.1 chromosome segregation protein SMC -
  P1J77_RS05645 (P1J77_05645) rnc 1165358..1166050 (-) 693 WP_002990670.1 ribonuclease III -
  P1J77_RS05650 (P1J77_05650) vicX 1166493..1167302 (-) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  P1J77_RS05655 (P1J77_05655) vicK 1167306..1168658 (-) 1353 WP_111676637.1 cell wall metabolism sensor histidine kinase VicK Regulator
  P1J77_RS05660 (P1J77_05660) vicR 1168651..1169361 (-) 711 WP_002985645.1 response regulator YycF Regulator
  P1J77_RS05665 (P1J77_05665) - 1169523..1170557 (-) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  P1J77_RS05670 (P1J77_05670) - 1170613..1171860 (-) 1248 WP_136274036.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=799951 P1J77_RS05650 WP_002985641.1 1166493..1167302(-) (vicX) [Streptococcus pyogenes strain 1039]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=799951 P1J77_RS05650 WP_002985641.1 1166493..1167302(-) (vicX) [Streptococcus pyogenes strain 1039]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACTATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758