Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   RDV59_RS03660 Genome accession   NZ_CP133476
Coordinates   715874..716680 (+) Length   268 a.a.
NCBI ID   WP_038675478.1    Uniprot ID   -
Organism   Streptococcus salivarius strain LMG 11489     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 710874..721680
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RDV59_RS03635 (RDV59_03635) tpiA 711028..711786 (+) 759 WP_002885895.1 triose-phosphate isomerase -
  RDV59_RS03640 (RDV59_03640) recP/tkt 712090..714075 (+) 1986 WP_038675476.1 transketolase Machinery gene
  RDV59_RS03650 (RDV59_03650) tmk 714364..714993 (+) 630 WP_021144578.1 dTMP kinase -
  RDV59_RS03655 (RDV59_03655) - 715002..715877 (+) 876 WP_021144577.1 DNA polymerase III subunit delta' -
  RDV59_RS03660 (RDV59_03660) yaaT 715874..716680 (+) 807 WP_038675478.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  RDV59_RS03665 (RDV59_03665) yabA 716667..716987 (+) 321 WP_002887582.1 DNA replication initiation control protein YabA -
  RDV59_RS03670 (RDV59_03670) rsmI 716990..717856 (+) 867 WP_038675481.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  RDV59_RS03675 (RDV59_03675) - 717993..719228 (+) 1236 WP_038675483.1 ammonium transporter -
  RDV59_RS03680 (RDV59_03680) - 719239..719580 (+) 342 WP_002886165.1 P-II family nitrogen regulator -
  RDV59_RS03685 (RDV59_03685) - 719671..720327 (+) 657 WP_038675485.1 glucosaminidase domain-containing protein -
  RDV59_RS03690 (RDV59_03690) - 720345..721166 (+) 822 WP_002885966.1 Cof-type HAD-IIB family hydrolase -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29729.10 Da        Isoelectric Point: 4.6456

>NTDB_id=799684 RDV59_RS03660 WP_038675478.1 715874..716680(+) (yaaT) [Streptococcus salivarius strain LMG 11489]
MTEVIGIKFEETGAVEYVVPDKNYAKDDFVVVLEKKDKRLAQVVMENTDFPEVSLPADLNRVEGLAGEKDFARYDENLLK
AEKSMGVVADLIAQNQLDMKVVDIVFPLNNSYVLISFVAEKRVDFRQLLKDLASYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGDEIETKDGTGQVVAIDVI
AGTIKVVFEKGRAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=799684 RDV59_RS03660 WP_038675478.1 715874..716680(+) (yaaT) [Streptococcus salivarius strain LMG 11489]
ATGACAGAAGTCATTGGAATAAAATTTGAAGAAACTGGAGCAGTAGAATACGTTGTTCCTGATAAAAATTACGCCAAAGA
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAGCGCCTAGCCCAGGTTGTCATGGAAAACACAGATTTTCCGGAGGTTA
GTTTGCCTGCGGATTTGAATCGGGTTGAAGGATTGGCAGGGGAGAAAGATTTCGCTAGATATGATGAAAATCTTTTGAAG
GCTGAAAAGAGTATGGGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTAGATATGAAGGTGGTTGATATTGTCTTTCC
GCTAAATAACTCTTATGTGTTAATCAGTTTTGTAGCTGAAAAACGGGTAGATTTTCGTCAGTTACTCAAAGACCTGGCTT
CTTACTTTAAGACACGCATTGAGTTGCGTCAAATTTCAAGTCGTGAGGAATCAAAAATCTATGGTGGCTTAGGACCTTGT
GGACGGGCGCTTTGTTGTTCTAGTTTTTTGGGTGAATTCCCACCAGTATCGATTAAGATGGCTAAAAATCAGAGTTTGTC
CTTGAATTCTGGTAAGATGAATGGGGTCTGTGGTCGACTTATGTGTTGTCTCAGTTATGAAGATGACTTTTACCGAGATA
GCAAGGCTAGCTATCCTGATTTGGGTGATGAAATTGAAACCAAGGATGGCACGGGTCAGGTCGTTGCCATTGATGTGATT
GCAGGGACCATTAAGGTTGTATTTGAAAAAGGGCGTGCGCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

42.322

99.627

0.422