Detailed information NTG0799427

Bioinformatically predicted

Overview

• Name: rexA
• Type: Machinery gene
• Locus tag: RDV54_RS02745
• Genome accession: NZ_CP133471
• Coordinates: 549402..553052 (-)
• Length: 1216 a.a.
• NCBI ID: WP_000802633.1
• Uniprot ID: -
• Organism: Streptococcus mitis strain LMG 14557
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 544402..558052

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RDV54_RS02725 (RDV54_02725)	-	544833..546383 (-)	1551	WP_004239419.1	ClC family H(+)/Cl(-) exchange transporter	-
RDV54_RS02730 (RDV54_02730)	-	546400..547179 (-)	780	WP_000201106.1	ribonuclease HII	-
RDV54_RS02735 (RDV54_02735)	ylqF	547166..548017 (-)	852	WP_000201321.1	ribosome biogenesis GTPase YlqF	-
RDV54_RS02740 (RDV54_02740)	-	548206..549384 (-)	1179	WP_000174770.1	hypothetical protein	-
RDV54_RS02745 (RDV54_02745)	rexA	549402..553052 (-)	3651	WP_000802633.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
RDV54_RS02750 (RDV54_02750)	rexB	553049..556324 (-)	3276	WP_004239416.1	ATP-dependent nuclease subunit B	Machinery gene
RDV54_RS02755 (RDV54_02755)	-	556442..557251 (+)	810	WP_000593586.1	Cof-type HAD-IIB family hydrolase	-

Sequence

Protein

• Length: 1216 a.a.
• Molecular weight: 140223.91 Da
• Isoelectric Point: 5.6641

>NTDB_id=799427 RDV54_RS02745 WP_000802633.1 549402..553052(-) (rexA) [Streptococcus mitis strain LMG 14557]
MKPIPFLTEEEIQKLQEAEANSSKEQKKTAEQIEAIYTSGQNILVSASAGSGKTFVMAERILDQLARGIEISQLFISTFT
VKAATELKERLEKKISQQIQETHNVDLKQHLGRQLADLPNAAIGTMDSFTQKFLGKHGYLLDIAPNFRILQNQSEQLLLK
NEVFHEVFEAHYQGKQKETFSHLLKNFAGRGKDERGLRQQVYKIYDFLQSTSNPQKWLSESFLKGFEKADFTSEKEKLTE
QIKQALWDLESFFRYHLGNDAKEFAKAPYLENVQLILDEIGSLNQESDSQAYQAVLARVVAISKEKNGRALTNASRKADL
KPLADAYNEERKTQFAKLGQLSDQITILDYQERYHGDTWELAKTFQTFMSDFVEAYRERKRQENAFEFADISHYTIEILE
KFPQGREAYQDRFHEVMVDEYQDTNHIQERMLELLSNGHNRFMVGDIKQSIYRFRQADPQIFNEKFQRYAQDSKEGKLIL
LKENFRSSSEVLSATNDVFKRLMDQEVGEINYDSMHQLVFANTKLTPNPDNKAEFLLYDKDDTGEEEESQTETKLTGEMR
LVIKEILKLHKEKSVAFKEIALLTSSRSRNDQILLALSEYGIPVKTDGEQNNYLQSLEVQVMLDTLRVIHNPLQDYALVA
LMKSPMFGFDEDELARLSLQKAEDKVQENLYEKLVNAQKQVASQKNLIHTDLTEKLNQFMDILASWRLYAKTHSLYDLIW
KIYNDRFYYDYVGALPNGPARQANLYALALRADQFEKSNFKGLSRFIRMIDQVLEAQHDLASVAVAPPKDAVELMTIHKS
KGLEFPYVFILNMDQDFNKQDSMSEVILSRKNGLGVKYIAKMETGAVEAHYPKTIKLSIPSLTYRQNEEELQLASYSEQM
RLLYVAMTRAEKKIYLVGKGSREKLESKEYPATKNGKLNSNTRLQARNFQDWIWAISKVFAKDHLNFSYRFVGEDQLTRE
AIGELENKSPLQDSSQADNRQSETIKEALEMLKEVEVYNTLHRAAIELPSVQTPSQIKKFYEPVMDMEGVEIAGQGQSVD
KKISFELPDFSTKEKVTGAEIGSATHELMQRIDLSQRPTLASLTETLKHVQTSPAVRDKINLAKILAFFDTALGQEILSN
TNHLYREQPFSMLKRDQKSQEDFVVRGILDGYLLYEDRIVLFDYKTDRYDEPSQLIDRYRGQLALYGEALSRAYSIENID
KYLILLGKDEVQVVKV

Nucleotide

• Length: 3651 bp

>NTDB_id=799427 RDV54_RS02745 WP_000802633.1 549402..553052(-) (rexA) [Streptococcus mitis strain LMG 14557]
ATGAAGCCCATTCCCTTTTTAACTGAGGAGGAAATTCAAAAACTGCAAGAAGCAGAAGCAAATTCGAGCAAGGAACAAAA
GAAAACTGCCGAACAAATCGAAGCCATCTACACTTCTGGTCAGAATATCCTTGTCTCAGCGTCGGCTGGTTCTGGGAAGA
CTTTTGTCATGGCCGAGCGTATTCTGGACCAATTGGCGCGTGGTATCGAAATTTCTCAACTCTTTATCTCAACCTTTACC
GTCAAGGCTGCGACTGAACTCAAAGAACGCTTGGAGAAAAAAATCAGCCAGCAAATCCAAGAAACGCATAATGTCGATCT
CAAACAACACTTGGGCCGCCAGTTGGCAGACCTACCCAACGCAGCCATCGGGACCATGGACTCTTTCACGCAAAAATTCC
TTGGTAAACATGGCTATCTGCTTGATATTGCGCCAAATTTCCGTATTTTACAAAACCAAAGCGAGCAACTTCTTCTAAAA
AACGAAGTCTTTCATGAGGTATTTGAAGCCCATTACCAAGGCAAACAGAAAGAGACCTTTAGTCATTTGCTGAAAAATTT
TGCAGGGCGTGGCAAGGATGAACGGGGGCTGCGCCAGCAGGTCTATAAAATCTATGACTTCCTCCAATCCACCAGCAATC
CTCAGAAATGGCTGAGTGAATCTTTCCTCAAAGGCTTTGAAAAAGCTGATTTTACTAGTGAAAAAGAAAAACTGACTGAG
CAAATCAAGCAAGCCCTTTGGGATTTGGAAAGCTTTTTCCGTTATCATCTGGGTAATGATGCCAAGGAGTTTGCAAAGGC
TCCCTATTTAGAAAATGTTCAGTTGATTCTGGATGAAATTGGCTCCTTAAATCAAGAGTCCGATAGTCAGGCTTATCAGG
CAGTGCTTGCGCGTGTTGTCGCAATTTCGAAAGAGAAAAACGGTCGGGCCCTGACTAATGCCAGTCGCAAGGCTGATTTG
AAGCCACTGGCGGATGCCTACAACGAAGAAAGAAAGACCCAGTTTGCTAAACTAGGACAACTGTCAGACCAGATAACCAT
TCTCGACTATCAAGAACGTTATCATGGAGATACCTGGGAACTAGCTAAGACTTTCCAAACCTTCATGAGTGATTTTGTGG
AAGCTTATCGTGAACGTAAGCGTCAGGAAAACGCCTTTGAATTCGCTGATATCAGCCATTACACCATTGAGATTTTAGAG
AAATTTCCTCAAGGCCGTGAGGCTTATCAGGATCGCTTCCACGAAGTCATGGTCGATGAGTATCAGGATACCAACCATAT
TCAAGAACGGATGCTGGAATTGCTGTCTAATGGTCACAATCGCTTTATGGTGGGAGATATCAAGCAGTCCATCTACCGTT
TCCGTCAGGCAGACCCGCAGATTTTCAATGAGAAATTCCAACGCTATGCGCAAGATTCCAAAGAAGGAAAGCTGATTCTA
CTCAAAGAAAATTTCCGTAGTAGTTCAGAAGTGCTATCAGCAACCAATGATGTTTTTAAACGTCTCATGGACCAAGAGGT
CGGTGAAATCAACTATGACAGCATGCACCAACTTGTTTTTGCCAATACCAAACTGACTCCCAATCCAGATAACAAAGCAG
AATTTCTCCTCTACGACAAGGACGATACAGGTGAGGAAGAAGAGAGTCAAACAGAAACGAAACTAACAGGCGAAATGCGT
CTGGTTATCAAGGAAATTCTTAAACTCCATAAGGAAAAAAGTGTTGCTTTTAAAGAAATTGCCCTTCTGACCTCCAGTCG
CAGTCGTAATGACCAGATTCTCCTTGCCTTGTCTGAGTACGGGATACCTGTCAAAACAGACGGCGAGCAAAACAATTATC
TCCAATCCCTAGAAGTGCAAGTCATGCTAGACACTCTTCGTGTCATTCATAATCCCCTGCAAGACTATGCCTTGGTTGCT
CTCATGAAGTCTCCTATGTTTGGATTTGATGAGGACGAGTTGGCACGCTTGTCTCTCCAGAAAGCAGAAGATAAAGTTCA
AGAAAATCTCTATGAAAAACTGGTCAATGCTCAAAAACAAGTAGCTAGCCAGAAAAACTTAATTCATACGGATTTAACTG
AAAAACTAAATCAATTCATGGATATCTTGGCTTCTTGGCGTCTGTATGCCAAAACTCACTCTCTCTATGACTTGATTTGG
AAGATTTACAACGACCGTTTTTACTATGACTATGTTGGAGCTTTGCCAAATGGCCCTGCTAGACAGGCCAATCTCTATGC
CCTAGCTCTTCGGGCTGACCAGTTTGAAAAGAGCAATTTCAAGGGCTTGTCTCGTTTTATCCGTATGATTGACCAAGTTT
TAGAAGCCCAGCACGATCTTGCAAGCGTGGCAGTTGCACCGCCTAAGGATGCTGTAGAACTCATGACCATTCACAAGAGT
AAAGGGCTGGAGTTTCCTTACGTTTTTATTCTCAATATGGATCAGGACTTCAATAAGCAAGACAGCATGTCAGAAGTCAT
TCTCAGTCGTAAAAATGGACTAGGTGTCAAATACATTGCCAAAATGGAGACAGGAGCAGTAGAAGCTCACTATCCGAAAA
CCATCAAGCTCTCTATTCCTAGCCTGACCTATAGGCAGAATGAAGAGGAATTACAGCTGGCAAGCTACTCAGAGCAGATG
CGTCTCCTTTATGTTGCCATGACGCGGGCTGAGAAAAAGATCTATCTTGTCGGCAAGGGTTCGCGTGAAAAGCTGGAATC
CAAGGAATACCCAGCAACTAAAAATGGGAAACTAAATAGCAATACCAGACTGCAAGCAAGAAATTTCCAAGATTGGATCT
GGGCTATCAGTAAAGTATTTGCCAAGGATCATCTCAACTTTAGCTATCGTTTTGTTGGCGAAGATCAGTTGACTAGAGAA
GCTATCGGTGAGTTGGAAAACAAGAGCCCTCTACAAGATAGCTCTCAAGCAGACAATCGCCAGTCTGAAACCATCAAAGA
AGCACTGGAAATGCTGAAAGAGGTGGAAGTTTATAATACTCTTCACCGCGCAGCCATTGAACTGCCAAGTGTTCAAACTC
CAAGTCAAATCAAGAAATTCTACGAACCAGTTATGGATATGGAAGGTGTCGAGATTGCAGGTCAAGGCCAGTCAGTAGAC
AAGAAAATTAGCTTTGAGTTACCAGATTTTTCAACCAAAGAAAAGGTAACAGGAGCTGAGATTGGTAGTGCTACCCACGA
ACTGATGCAGAGAATTGACCTCAGTCAGCGACCAACCCTTGCTAGCCTAACAGAAACTCTCAAACACGTTCAAACCAGCC
CAGCTGTCAGAGACAAGATCAATCTTGCTAAAATTCTTGCATTCTTTGACACAGCACTCGGTCAGGAAATTCTCTCTAAT
ACCAACCATCTTTATCGCGAGCAACCTTTCTCCATGCTCAAACGAGACCAAAAGAGTCAGGAAGACTTTGTTGTCCGTGG
TATCCTTGATGGCTATCTGCTTTACGAGGACAGAATTGTTCTGTTCGACTATAAGACAGACCGCTATGATGAACCAAGTC
AACTCATAGACCGTTATCGTGGTCAGTTAGCCCTATACGGAGAGGCTTTATCTCGAGCCTATTCGATTGAAAATATTGAC
AAATACTTGATTTTACTCGGTAAAGACGAGGTTCAAGTTGTAAAAGTATAA

Domains

Predicted by InterProScan.

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (1054-1193)

• UvrD/REP helicase N-terminal domain (UvrD-helicase) (29-469)

• UvrD-like helicase C-terminal domain (UvrD_C) (479-896)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rexA	Streptococcus pneumoniae R6	94.737	100	0.947