Detailed information NTG0799425

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: P0M04_RS12730
• Genome accession: NZ_CP119520
• Coordinates: 2837188..2838621 (+)
• Length: 477 a.a.
• NCBI ID: WP_259450827.1
• Uniprot ID: -
• Organism: Telluria mixta strain ACM 1762
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 2832188..2843621

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P0M04_RS12705 (P0M04_12715)	-	2832541..2833374 (+)	834	WP_259450822.1	ABC transporter permease	-
P0M04_RS12710 (P0M04_12720)	-	2833377..2834171 (+)	795	WP_259450823.1	ABC transporter ATP-binding protein	-
P0M04_RS12715 (P0M04_12725)	-	2834350..2835153 (+)	804	WP_259450824.1	inner membrane protein YpjD	-
P0M04_RS12720 (P0M04_12730)	-	2835150..2835449 (+)	300	WP_259450825.1	PP0621 family protein	-
P0M04_RS12725 (P0M04_12735)	-	2835458..2837185 (+)	1728	WP_259450826.1	PAS domain-containing sensor histidine kinase	-
P0M04_RS12730 (P0M04_12740)	pilR	2837188..2838621 (+)	1434	WP_259450827.1	sigma-54 dependent transcriptional regulator	Regulator
P0M04_RS12735 (P0M04_12745)	-	2839058..2841970 (+)	2913	WP_259450828.1	ribonucleoside-diphosphate reductase subunit alpha	-
P0M04_RS12740 (P0M04_12750)	-	2842054..2843157 (+)	1104	WP_259450829.1	ribonucleotide-diphosphate reductase subunit beta	-

Sequence

Protein

• Length: 477 a.a.
• Molecular weight: 51065.76 Da
• Isoelectric Point: 4.9792

>NTDB_id=799425 P0M04_RS12730 WP_259450827.1 2837188..2838621(+) (pilR) [Telluria mixta strain ACM 1762]
MSSPRILVVDDEPDLRELLEITLLKMGLDVDSAATVREARTLLGQKSFALVLTDMRLPDGLGLELVREVAANHKSTPIAV
ITAYGSAENAVVALKAGAFDYVSKPVVLDDLRAMVRAALKLSEPAAAPAASQAGETSRLIGQSPAMQALRAQIARLARSQ
APIAINGESGSGKELAAREIHAQGARAGKPFVAVNCGAIPEALMEAEFFGYRKGAFTGANDERDGFFQAANGGTLMLDEV
ADLPLAMQVKLLRAIQERRVRKIGATVEEPVDVRIISATHKDLAKCVENGSFRQDLFYRLNVIELTLPPLRERLDDLPLL
VDAILARLAGPGGARLGPGVLEALRGYAFPGNVRELENVLERALAFADDGVIEAGDLLLKGAKLGDAAVVPPPPQTPVSA
APEPKLELEQAAPPPQLADDALPSNLPDYLSQVERDIILRALNQTQFNRTQAASLLGISVRQLRYQMQKLDIHAPEP

Nucleotide

• Length: 1434 bp

>NTDB_id=799425 P0M04_RS12730 WP_259450827.1 2837188..2838621(+) (pilR) [Telluria mixta strain ACM 1762]
ATGAGCTCACCCCGCATCCTGGTGGTCGACGACGAACCCGACCTGCGCGAGCTGCTCGAGATCACCCTGCTCAAGATGGG
GCTCGACGTGGACAGCGCCGCGACCGTCCGCGAGGCGCGTACGCTGCTGGGACAAAAGTCGTTTGCGCTGGTGCTGACCG
ACATGCGCCTGCCCGACGGCCTGGGCCTGGAGCTCGTGCGCGAGGTGGCGGCCAATCACAAAAGCACGCCCATCGCCGTG
ATCACCGCGTACGGCAGCGCCGAGAATGCCGTCGTGGCGCTGAAGGCCGGCGCGTTCGACTACGTGTCGAAGCCCGTCGT
GCTGGACGACCTGCGTGCGATGGTGCGCGCGGCATTGAAACTGTCCGAGCCGGCGGCCGCGCCGGCCGCCAGCCAGGCCG
GAGAAACGTCGCGCCTGATCGGGCAATCGCCCGCGATGCAGGCGCTGCGTGCCCAGATCGCGCGGCTGGCCCGCTCGCAG
GCGCCGATCGCCATCAACGGCGAATCCGGGAGCGGCAAGGAACTGGCCGCGCGCGAAATCCACGCCCAGGGCGCGCGCGC
GGGCAAACCGTTCGTCGCCGTGAACTGCGGCGCGATTCCCGAGGCGCTGATGGAGGCCGAGTTCTTCGGCTACCGCAAGG
GCGCGTTCACGGGCGCGAACGACGAACGCGACGGCTTCTTCCAGGCCGCCAACGGCGGCACCCTGATGCTCGACGAGGTG
GCCGACCTGCCGCTCGCGATGCAGGTGAAACTGCTGCGCGCGATCCAGGAGCGGCGCGTGCGCAAGATCGGCGCCACGGT
CGAGGAACCGGTCGATGTGCGCATCATCAGCGCCACGCACAAGGATCTCGCGAAGTGTGTGGAAAACGGCAGCTTCCGCC
AGGACCTGTTCTACCGCCTGAACGTCATCGAACTGACGTTGCCGCCACTGCGCGAGCGCCTGGACGATCTGCCGCTGCTG
GTGGACGCCATCCTCGCGCGCCTGGCCGGGCCGGGCGGGGCGAGACTGGGTCCCGGCGTGCTGGAAGCGTTGCGCGGCTA
TGCGTTCCCGGGCAACGTGCGCGAGCTGGAAAACGTGCTGGAGCGCGCGCTCGCGTTTGCCGACGACGGCGTGATCGAGG
CGGGCGACCTGCTGCTGAAGGGCGCGAAGCTGGGCGACGCGGCCGTCGTGCCGCCGCCGCCGCAGACGCCAGTGAGCGCG
GCACCGGAGCCGAAATTGGAGCTGGAGCAGGCCGCGCCGCCGCCGCAGCTGGCCGACGATGCGCTGCCGAGCAACCTGCC
GGACTACCTGAGCCAGGTCGAGCGCGACATCATCCTGCGCGCGCTGAACCAGACCCAGTTCAACCGTACGCAGGCCGCCA
GCCTGCTCGGCATCAGTGTCCGGCAGCTGCGCTACCAGATGCAGAAACTGGACATCCACGCGCCGGAGCCTTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (6-115)

• Bacterial regulatory protein, Fis family (HTH_8) (430-470)

• Sigma-54 interaction domain (Sigma54_activat) (139-305)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	55.789	99.581	0.556
pilR	Acinetobacter baumannii strain A118	44.304	99.371	0.44