Detailed information NTG0799372

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: RDV53_RS05145
• Genome accession: NZ_CP133470
• Coordinates: 1037597..1040428 (+)
• Length: 943 a.a.
• NCBI ID: WP_005695202.1
• Uniprot ID: -
• Organism: Haemophilus parainfluenzae ATCC 33392 strain DSM 8978
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1032597..1045428

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RDV53_RS05130 (RDV53_05130)	-	1034029..1035549 (-)	1521	WP_005695198.1	site-specific integrase	-
RDV53_RS05135 (RDV53_05135)	-	1035536..1036822 (-)	1287	WP_005695200.1	site-specific integrase	-
RDV53_RS05140 (RDV53_05140)	ssb	1036967..1037434 (-)	468	WP_005695201.1	single-stranded DNA-binding protein	Machinery gene
RDV53_RS05145 (RDV53_05145)	uvrA	1037597..1040428 (+)	2832	WP_005695202.1	excinuclease ABC subunit UvrA	Machinery gene
RDV53_RS05150 (RDV53_05150)	-	1040543..1041652 (+)	1110	WP_005695203.1	prolyl oligopeptidase family serine peptidase	-
RDV53_RS05160 (RDV53_05160)	-	1042254..1043762 (-)	1509	WP_005695205.1	hypothetical protein	-
RDV53_RS05165 (RDV53_05165)	-	1043947..1045020 (-)	1074	WP_005695206.1	Fic family protein	-

Sequence

Protein

• Length: 943 a.a.
• Molecular weight: 104119.91 Da
• Isoelectric Point: 6.6712

>NTDB_id=799372 RDV53_RS05145 WP_005695202.1 1037597..1040428(+) (uvrA) [Haemophilus parainfluenzae ATCC 33392 strain DSM 8978]
MDTIDIRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDSIEGLS
PAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARVGEPRCPEHDVPLTAQTISQMVDKVLSLPEESKMMLLAPVVKNRKG
EHVKLLDSLAAQGYIRARIDGEICDLSDPPELALQKKHTIEVVVDRFKVRSDLATRLAESFETALELSGGTAVVADMGNP
KAEELVFSANFACPHCGYSVPELEPRLFSFNNPAGACPTCDGLGVQQFFDESRVVQNESISLAGGAVKGWDRRNFYYYQM
LTSLAKHYKFDIETPYEDLPQKIKDIVMHGSGKEEIEFQYMNDRGDVVIRKHPFEGILNNMARRYKETESMSVREELAKN
ISNRPCADCGGSRLRPEARNVYIGNINLPQISEKSIGESLEFFQGLTLTGQKAQIAEKILKEIRERLEFLVNVGLNYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNTVIVVEHDEDAIREADHIIDI
GPGAGVHGGQVIAQGTAKEIMANPNSITGKFLSGEEKIEIPKKRTALDKSKLLKLKGATGNNLKGVNLEIPVGLFTCITG
VSGSGKSTLINDTLFPLAQNALNRAEKTDFAPYKSIEGLEYFDKVIDINQSPLGRTPRSNPATYTGLFTPIRELFAGVPE
ARARGYNLGRFSFNVRGGRCEACQGDGVLKVEMHFLPDVYVPCDQCKGKRYNRETLEIRYKGKTIHQVLDMTVEEAREFF
DAIPMIARKLQTLMDVGLSYIRLGQSSTTLSGGEAQRVKLATELSKRDTGKTLYILDEPTTGLHFADIKQLLEVLHRLRD
QGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGQIIATGTPEDVAKVKGSHTARFLKDILAKG

Nucleotide

• Length: 2832 bp

>NTDB_id=799372 RDV53_RS05145 WP_005695202.1 1037597..1040428(+) (uvrA) [Haemophilus parainfluenzae ATCC 33392 strain DSM 8978]
ATGGATACTATCGACATTCGTGGGGCTAGAACTCACAACCTTAAAAACATCAATCTAACCATTCCGCGTGATAAATTAAT
TGTGATTACAGGTTTGTCCGGTTCGGGCAAATCCTCTTTAGCATTTGATACGCTTTATGCGGAAGGGCAGCGCCGTTATG
TAGAATCGCTCTCTGCTTATGCGCGTCAGTTCCTTTCTTTGATGGAAAAGCCGGATGTGGATTCAATTGAGGGCTTGTCA
CCAGCGATTTCTATTGAGCAAAAATCCACTTCTCATAACCCGCGTTCAACAGTGGGCACGATCACCGAAATTTATGATTA
TCTGCGTTTGCTGTTTGCTCGCGTAGGGGAGCCACGCTGTCCTGAGCATGATGTGCCATTAACGGCACAAACCATCAGCC
AAATGGTGGATAAAGTCTTAAGCTTGCCTGAAGAAAGCAAAATGATGTTGCTTGCGCCCGTGGTGAAAAATCGTAAAGGT
GAGCATGTTAAGCTGTTAGATAGCTTGGCGGCACAAGGTTATATTCGTGCAAGAATTGATGGTGAAATCTGTGATTTATC
TGATCCGCCAGAACTTGCTTTACAGAAAAAACATACCATTGAAGTGGTGGTGGATCGTTTTAAAGTGCGGTCAGATTTAG
CCACACGTTTGGCGGAATCCTTTGAAACAGCTTTGGAGCTTTCTGGTGGTACGGCTGTTGTAGCGGATATGGGTAATCCG
AAAGCGGAAGAGCTAGTTTTCTCGGCGAATTTTGCTTGTCCGCATTGTGGCTATTCTGTGCCCGAATTAGAGCCTCGCTT
GTTCTCATTTAATAACCCAGCAGGGGCGTGCCCGACTTGTGATGGCTTAGGTGTTCAGCAGTTCTTCGATGAAAGCCGAG
TGGTACAAAATGAAAGCATTTCCCTCGCAGGTGGTGCGGTGAAAGGTTGGGATCGTCGTAATTTCTATTACTATCAAATG
CTTACCTCGTTAGCGAAACATTATAAATTTGATATTGAAACGCCATACGAAGATTTGCCTCAAAAAATTAAAGATATTGT
GATGCACGGTTCAGGCAAGGAAGAAATTGAATTCCAATATATGAACGACCGTGGCGATGTGGTGATCCGTAAGCATCCTT
TTGAAGGGATTTTGAATAATATGGCGCGCCGTTACAAAGAAACGGAATCCATGTCTGTGCGCGAAGAATTGGCGAAAAAT
ATCAGTAACCGCCCTTGTGCAGATTGTGGCGGCTCTCGTCTTCGCCCTGAAGCTCGAAACGTGTATATCGGTAATATTAA
CTTGCCACAAATTTCAGAGAAAAGCATTGGTGAAAGCCTTGAGTTTTTCCAAGGGCTTACTTTAACCGGTCAAAAAGCAC
AAATTGCAGAAAAAATCCTGAAAGAGATCAGAGAACGGTTAGAATTCTTAGTGAATGTGGGTTTGAATTATCTTTCCCTT
TCTCGTTCTGCCGAAACCCTTTCGGGTGGTGAAGCGCAACGTATTCGTCTTGCGAGTCAGATCGGTGCGGGCTTAGTAGG
CGTCATGTATGTGTTGGATGAGCCTTCAATCGGTTTACATCAACGCGATAATGAACGCTTGCTAAATACGCTGATTCACT
TGCGTAATTTGGGTAACACTGTAATTGTGGTGGAACATGATGAAGATGCTATTCGAGAAGCGGATCATATTATTGATATT
GGCCCTGGGGCGGGGGTGCATGGTGGCCAAGTGATTGCACAAGGGACAGCCAAAGAGATTATGGCAAACCCAAATTCGAT
TACAGGTAAGTTCTTATCGGGTGAAGAAAAAATCGAAATTCCGAAAAAACGAACCGCACTTGATAAAAGCAAACTTTTAA
AATTAAAAGGCGCGACAGGGAATAATCTTAAAGGCGTAAATTTAGAGATTCCAGTGGGCTTATTTACTTGTATCACGGGG
GTGTCAGGTTCAGGTAAATCAACGCTAATTAATGATACGTTATTCCCATTGGCACAAAACGCCTTAAATCGTGCGGAAAA
AACAGATTTTGCGCCTTATAAATCCATTGAAGGCTTGGAATATTTCGATAAAGTGATCGATATTAACCAAAGCCCGCTCG
GTCGTACACCGCGTTCTAACCCAGCGACTTACACGGGATTATTTACCCCAATTCGTGAATTATTTGCGGGCGTGCCAGAA
GCGCGTGCGCGTGGTTATAACCTAGGACGTTTTAGCTTTAACGTGCGTGGTGGACGTTGTGAAGCATGCCAAGGTGATGG
TGTGCTGAAAGTTGAAATGCACTTCTTACCGGATGTGTATGTGCCTTGTGATCAATGTAAAGGTAAACGCTATAACCGTG
AAACCTTGGAGATCCGTTATAAAGGCAAAACTATTCACCAAGTGTTAGATATGACGGTAGAAGAAGCTCGTGAGTTTTTT
GATGCGATCCCAATGATTGCGCGTAAATTGCAAACCCTAATGGATGTAGGCTTGTCTTATATTCGTTTAGGTCAGTCTTC
TACCACACTTTCAGGTGGTGAGGCACAACGCGTTAAGTTAGCAACGGAGCTTTCAAAACGCGATACCGGTAAAACTCTTT
ATATTTTGGATGAGCCGACGACTGGCTTACATTTCGCCGATATTAAACAACTTCTCGAGGTGTTACATCGCTTACGCGAT
CAAGGCAATACCATCGTGGTGATCGAACACAATTTAGATGTGATCAAAACCGCAGACTGGATTGTGGATCTTGGTCCAGA
AGGGGGCAGTGGCGGTGGTCAAATCATTGCGACAGGCACACCGGAAGACGTGGCTAAAGTCAAAGGTTCGCATACCGCGA
GATTCCTGAAAGATATCTTAGCAAAAGGCTAG

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (130-236)

• UvrA DNA-binding domain (UvrA_DNA-bind) (290-399)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	57.128	99.682	0.569
uvrA	Streptococcus pneumoniae TIGR4	57.128	99.682	0.569
uvrA	Streptococcus pneumoniae D39	57.128	99.682	0.569