Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   P1T45_RS03415 Genome accession   NZ_CP119427
Coordinates   600569..601378 (+) Length   269 a.a.
NCBI ID   WP_037619792.1    Uniprot ID   A0AAE4L2Y1
Organism   Streptococcus parauberis strain KSP45     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 595569..606378
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P1T45_RS03390 (P1T45_03395) - 595928..596632 (-) 705 WP_003104614.1 amino acid ABC transporter permease -
  P1T45_RS03395 (P1T45_03400) - 596646..597461 (-) 816 WP_003106354.1 transporter substrate-binding domain-containing protein -
  P1T45_RS03400 (P1T45_03405) - 597474..598253 (-) 780 WP_003106355.1 amino acid ABC transporter ATP-binding protein -
  P1T45_RS03405 (P1T45_03410) vicR 598501..599211 (+) 711 WP_003102576.1 response regulator YycF Regulator
  P1T45_RS03410 (P1T45_03415) vicK 599204..600564 (+) 1361 Protein_621 cell wall metabolism sensor histidine kinase VicK -
  P1T45_RS03415 (P1T45_03420) vicX 600569..601378 (+) 810 WP_037619792.1 MBL fold metallo-hydrolase Regulator
  P1T45_RS03420 (P1T45_03425) rnc 601476..602168 (+) 693 WP_003103277.1 ribonuclease III -
  P1T45_RS03425 (P1T45_03430) smc 602169..605712 (+) 3544 Protein_624 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30296.19 Da        Isoelectric Point: 5.7226

>NTDB_id=799246 P1T45_RS03415 WP_037619792.1 600569..601378(+) (vicX) [Streptococcus parauberis strain KSP45]
MENFGFKYSILASGSTGNSFYLETPKQKILVDAGLTGKKMTSLLAEIDRKPEDLDAILITHEHSDHIKGVGVLARKYHLD
IYANQNTWKIIDDRNMIGKIDSEHKHIFDRDKVMTFGDIDIESFGVSHDAHDPQFYRFMKDNKSFVMLTDTGYVSDRMSG
IIENADGYLIESNHDIEILRSGGYPWSLKQRILSDRGHLSNEDGAQAMIRSMGNATKKIYLGHLSKENNIKELAHMTMEN
QLAMADLAVGSDFKVYDTSPDTASPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=799246 P1T45_RS03415 WP_037619792.1 600569..601378(+) (vicX) [Streptococcus parauberis strain KSP45]
ATGGAGAATTTTGGATTTAAATATAGTATATTAGCCTCTGGTTCAACAGGAAACAGTTTTTACTTGGAAACACCAAAGCA
AAAGATTTTGGTCGATGCAGGACTCACTGGTAAAAAAATGACAAGTCTCTTAGCTGAGATTGATCGGAAACCTGAAGATT
TAGATGCTATCTTGATTACACATGAACATTCTGACCATATTAAAGGTGTCGGGGTATTGGCTAGAAAATATCATTTAGAT
ATCTATGCTAATCAAAATACTTGGAAAATAATTGATGACCGCAATATGATTGGCAAAATTGATTCCGAACACAAACATAT
CTTTGATCGGGATAAAGTCATGACTTTTGGTGATATTGATATTGAAAGTTTTGGGGTTAGTCATGATGCCCATGATCCGC
AGTTTTATCGTTTTATGAAGGATAACAAATCCTTTGTCATGTTGACTGATACTGGTTACGTCTCGGATCGCATGTCGGGA
ATTATTGAAAATGCTGATGGTTACTTGATTGAATCAAATCATGACATCGAAATTTTAAGATCTGGTGGCTATCCTTGGAG
CTTAAAACAACGTATATTGTCTGATAGAGGGCATTTATCTAACGAAGATGGTGCACAAGCTATGATACGAAGTATGGGAA
ATGCTACTAAGAAGATTTATCTTGGACATTTGAGTAAAGAAAATAATATCAAAGAGTTGGCTCATATGACGATGGAAAAT
CAACTAGCTATGGCAGACTTAGCTGTCGGTTCTGATTTCAAAGTCTACGATACCTCCCCTGATACGGCTAGTCCTTTGAC
AGATATCTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758