Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   RDJ18_RS05775 Genome accession   NZ_CP133442
Coordinates   1102712..1103452 (+) Length   246 a.a.
NCBI ID   WP_000216878.1    Uniprot ID   A0A0H2XJD3
Organism   Staphylococcus aureus strain SA191     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1097712..1108452
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RDJ18_RS05750 (RDJ18_05750) yhaM 1098130..1099071 (+) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -
  RDJ18_RS05755 (RDJ18_05755) - 1099192..1100154 (-) 963 WP_000782131.1 foldase protein PrsA -
  RDJ18_RS05760 (RDJ18_05760) - 1100359..1100916 (-) 558 WP_000477959.1 DUF3267 domain-containing protein -
  RDJ18_RS05765 (RDJ18_05765) - 1101649..1102014 (-) 366 WP_000648118.1 YtxH domain-containing protein -
  RDJ18_RS05770 (RDJ18_05770) - 1102156..1102578 (-) 423 WP_000004981.1 HIT family protein -
  RDJ18_RS05775 (RDJ18_05775) pptA 1102712..1103452 (+) 741 WP_000216878.1 ABC transporter ATP-binding protein Regulator
  RDJ18_RS05780 (RDJ18_05780) - 1103445..1104668 (+) 1224 WP_001245770.1 ABC transporter permease -
  RDJ18_RS05785 (RDJ18_05785) traP 1104792..1105295 (-) 504 WP_000737976.1 signal transduction protein TRAP -
  RDJ18_RS05790 (RDJ18_05790) - 1105458..1105568 (+) 111 WP_001790154.1 hypothetical protein -
  RDJ18_RS05795 (RDJ18_05795) hemE 1105558..1106595 (+) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  RDJ18_RS05800 (RDJ18_05800) hemH 1106653..1107576 (+) 924 WP_000162881.1 ferrochelatase -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27717.04 Da        Isoelectric Point: 4.6672

>NTDB_id=798977 RDJ18_RS05775 WP_000216878.1 1102712..1103452(+) (pptA) [Staphylococcus aureus strain SA191]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDETMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=798977 RDJ18_RS05775 WP_000216878.1 1102712..1103452(+) (pptA) [Staphylococcus aureus strain SA191]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAACGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAGTTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTACTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2XJD3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545