Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   P0G38_RS05850 Genome accession   NZ_CP119393
Coordinates   1190254..1191522 (+) Length   422 a.a.
NCBI ID   WP_275854404.1    Uniprot ID   -
Organism   Enterococcus casseliflavus strain ASE4     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1185254..1196522
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P0G38_RS05825 (P0G38_05825) tsf 1185999..1186880 (+) 882 WP_005229432.1 translation elongation factor Ts -
  P0G38_RS05830 (P0G38_05830) pyrH 1187028..1187750 (+) 723 WP_275854398.1 UMP kinase -
  P0G38_RS05835 (P0G38_05835) frr 1187752..1188309 (+) 558 WP_005229434.1 ribosome recycling factor -
  P0G38_RS05840 (P0G38_05840) - 1188501..1189301 (+) 801 WP_010749317.1 isoprenyl transferase -
  P0G38_RS05845 (P0G38_05845) - 1189298..1190104 (+) 807 WP_010749318.1 phosphatidate cytidylyltransferase -
  P0G38_RS05850 (P0G38_05850) eeP 1190254..1191522 (+) 1269 WP_275854404.1 RIP metalloprotease RseP Regulator
  P0G38_RS05855 (P0G38_05855) - 1191592..1193301 (+) 1710 WP_275854407.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 45415.65 Da        Isoelectric Point: 4.4845

>NTDB_id=798815 P0G38_RS05850 WP_275854404.1 1190254..1191522(+) (eeP) [Enterococcus casseliflavus strain ASE4]
MKTILVFIIIFSVVVVIHEFGHYFFAKRAGILVREFAIGMGPKLFAHQAKDGTTYTIRMLPLGGYVQMAGWGEDETELTP
GMPVSLVQDATGKVIKINTSKKIQLPQAIPMEVTDFDLEEKLTITGFINGNEQEAITYAVDHDATIIHEDGVEVRIAPKD
VQFQSAKLWQRMLTNFAGPMNNFILSLVLFTGLVFAQGGVANQDATIATGIEAGTPAAEAGLQNGDEILAVEGVDVSNWS
ELTTEIQKYPDTQIALSVKRGSETLDLTATPASQESGETTIGFLGITASLKTGIGDILLGGLQTTIDNSLVIFRAVGNLI
AQPDINKLGGPVAIFQLSSQAASQGVTTVIAMMAMISINLGIFNLLPIPGLDGGKLVLNILEGLRGKPISQEKEGIITLI
GFGFLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=798815 P0G38_RS05850 WP_275854404.1 1190254..1191522(+) (eeP) [Enterococcus casseliflavus strain ASE4]
ATGAAAACGATACTTGTATTTATCATTATCTTTTCCGTAGTGGTAGTGATTCACGAGTTTGGACACTACTTCTTTGCAAA
ACGGGCAGGTATTTTAGTAAGAGAGTTTGCCATCGGTATGGGGCCTAAATTGTTCGCGCATCAAGCGAAAGATGGGACGA
CCTACACGATTCGGATGCTGCCATTAGGCGGGTATGTCCAAATGGCGGGCTGGGGTGAAGATGAAACAGAATTAACACCA
GGTATGCCAGTCTCCTTGGTTCAAGATGCAACTGGCAAAGTTATCAAAATCAATACGAGCAAAAAGATCCAATTGCCGCA
AGCGATCCCTATGGAAGTGACCGACTTTGACTTGGAGGAGAAGTTGACGATCACAGGGTTCATCAATGGCAATGAACAAG
AAGCGATTACGTACGCTGTGGATCATGATGCAACGATCATCCATGAAGATGGCGTTGAAGTTCGGATCGCACCTAAAGAC
GTTCAATTCCAGTCCGCAAAGCTTTGGCAGCGAATGCTGACGAATTTTGCTGGACCGATGAACAACTTTATTTTATCCTT
GGTCTTATTCACTGGGTTGGTGTTTGCACAAGGTGGTGTTGCGAATCAAGATGCAACCATCGCGACAGGAATCGAAGCAG
GAACACCGGCAGCTGAAGCCGGGCTGCAAAATGGCGACGAAATCTTAGCTGTCGAAGGCGTCGATGTTTCCAACTGGTCA
GAATTAACGACTGAGATTCAAAAGTATCCAGATACTCAGATTGCTCTATCAGTCAAACGAGGATCAGAAACACTTGATTT
GACGGCAACTCCTGCGAGTCAAGAATCAGGGGAGACCACGATCGGTTTCCTAGGGATCACCGCTTCCTTAAAAACTGGGA
TCGGAGATATCTTACTGGGTGGCTTGCAAACGACCATTGACAATTCACTGGTGATTTTTAGAGCAGTCGGCAACTTGATT
GCCCAACCAGATATCAATAAATTGGGTGGACCGGTTGCGATTTTCCAACTGTCTTCTCAAGCTGCATCGCAAGGTGTAAC
AACGGTGATCGCGATGATGGCGATGATTTCTATCAACTTGGGGATCTTTAATTTATTACCGATTCCTGGATTGGATGGCG
GTAAGCTGGTTTTAAATATTTTAGAAGGTTTGCGAGGCAAGCCAATCAGCCAAGAAAAAGAAGGCATCATTACTCTGATT
GGGTTTGGGTTTTTGATGCTGCTGATGGTTCTCGTTACCTGGAATGATATCCAACGTTTCTTCTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(207-268)

Peptidase family M50 (Peptidase_M50)

(7-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

52.225

100

0.528
  eeP Streptococcus thermophilus LMG 18311

51.288

100

0.519