Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PY254_RS06350 Genome accession   NZ_CP119392
Coordinates   1491607..1492017 (+) Length   136 a.a.
NCBI ID   WP_281014633.1    Uniprot ID   -
Organism   Rhodanobacter sp. AS-Z3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1486607..1497017
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PY254_RS06325 (PY254_06325) - 1487392..1488318 (-) 927 WP_281014628.1 aspartate carbamoyltransferase catalytic subunit -
  PY254_RS06330 (PY254_06330) ruvX 1488346..1488795 (-) 450 WP_281014629.1 Holliday junction resolvase RuvX -
  PY254_RS06335 (PY254_06335) - 1488792..1489361 (-) 570 WP_281014630.1 YqgE/AlgH family protein -
  PY254_RS06340 (PY254_06340) - 1489411..1490277 (-) 867 WP_281014631.1 energy transducer TonB -
  PY254_RS06345 (PY254_06345) gshB 1490274..1491251 (-) 978 WP_281014632.1 glutathione synthase -
  PY254_RS06350 (PY254_06350) pilG 1491607..1492017 (+) 411 WP_281014633.1 response regulator Regulator
  PY254_RS06355 (PY254_06355) - 1492040..1492411 (+) 372 WP_281014634.1 response regulator -
  PY254_RS06360 (PY254_06360) - 1492408..1492947 (+) 540 WP_281014635.1 chemotaxis protein CheW -
  PY254_RS06365 (PY254_06365) - 1493075..1495105 (+) 2031 WP_281014636.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14965.38 Da        Isoelectric Point: 8.5071

>NTDB_id=798789 PY254_RS06350 WP_281014633.1 1491607..1492017(+) (pilG) [Rhodanobacter sp. AS-Z3]
MNLNVSANDLAGLKVMVIDDSKTIRRTAETLLKKEGCEVLTAVDGFEALAKISDQKPAIIFVDIMMPRLDGYQTCALIKN
NPQFRATPVIMLSSKDGLFDKARGRIVGAEQYLTKPFTRDELLGAIHSHVSTATNR

Nucleotide


Download         Length: 411 bp        

>NTDB_id=798789 PY254_RS06350 WP_281014633.1 1491607..1492017(+) (pilG) [Rhodanobacter sp. AS-Z3]
GTGAATTTGAACGTGAGTGCGAACGATTTGGCTGGTCTCAAGGTCATGGTGATTGATGACTCGAAGACTATCCGCCGTAC
TGCTGAGACCCTGCTCAAGAAGGAGGGTTGTGAGGTATTGACGGCGGTGGACGGGTTCGAGGCGCTCGCCAAGATTTCCG
ACCAGAAGCCGGCAATCATCTTCGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCCCTGATCAAGAAC
AACCCGCAGTTCCGCGCCACGCCGGTGATCATGCTTTCCTCCAAGGACGGCTTGTTCGACAAGGCGCGTGGTCGCATCGT
GGGTGCCGAACAGTATCTGACCAAGCCGTTTACGCGAGACGAACTGCTTGGTGCCATTCATAGCCACGTCAGCACGGCAA
CCAATCGCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.984

90.441

0.669
  vicR Streptococcus mutans UA159

40.164

89.706

0.36