Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   Q3101_RS10535 Genome accession   NZ_CP133215
Coordinates   2250555..2252288 (+) Length   577 a.a.
NCBI ID   WP_064727758.1    Uniprot ID   A0A191UXI3
Organism   Streptomyces sp. VNUA74     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2245555..2257288
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3101_RS10505 (Q3101_10505) - 2246151..2247932 (+) 1782 WP_230069446.1 ThuA domain-containing protein -
  Q3101_RS10525 (Q3101_10525) - 2248592..2248906 (+) 315 WP_079163499.1 YtxH domain-containing protein -
  Q3101_RS10530 (Q3101_10530) - 2248963..2250417 (+) 1455 WP_226483674.1 FGGY-family carbohydrate kinase -
  Q3101_RS10535 (Q3101_10535) rcrP 2250555..2252288 (+) 1734 WP_064727758.1 ABC transporter ATP-binding protein Regulator
  Q3101_RS10540 (Q3101_10540) rcrQ 2252288..2254216 (+) 1929 WP_230069444.1 ABC transporter ATP-binding protein Regulator
  Q3101_RS10545 (Q3101_10545) - 2254343..2255848 (+) 1506 WP_064727760.1 APC family permease -
  Q3101_RS10550 (Q3101_10550) - 2255850..2256266 (+) 417 WP_226483680.1 universal stress protein -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62449.55 Da        Isoelectric Point: 5.7529

>NTDB_id=798742 Q3101_RS10535 WP_064727758.1 2250555..2252288(+) (rcrP) [Streptomyces sp. VNUA74]
MLIRLLRTYLRPYKKPIALLVALQFLQTCASLYLPTLNADIIDNGVVKGDSGYILGYGAVMIGISLAQVVCNIGAVYYGA
RTASALGRDVRGAVFDRVQSFSARELGGFGAPSLITRTTNDVQQVQMLALMTFTLMVSAPIMCVGGIVMALGLDVPLSGV
LVGVVPVLAVSVTLIVRKLRPLFRAMQVRLDTVNRVLREQITGNRVIRAFVRDDYEQERFRKANTELTEVALGTGNLLAL
MFPVVMTVVNLSSIAVVWFGAHRIDSGGMQIGDLTAFLAYLMQIVMSVMMATFMFMMVPRAEVCAERIQEVLDTESSVVP
PLAPVTELRRHGHLEIRGAGFRYPGAEEPVLRHIELTARPGETTAVIGSTGSGKSTLLGLVPRLFDATDGAVLVDGVDVR
DVDPKVLARIVGLVPQKPYLFAGTVATNLRYGNPDATDEELWHALEVAQAKDFVAALEGGLDAPVAQGGTNVSGGQRQRL
AIARTLVQRPEIYLFDDSFSALDYATDAALRAELGRETAEATVVIVAQRVATIRDADRIVVLDEGRVVGVGRHHELMADN
ETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=798742 Q3101_RS10535 WP_064727758.1 2250555..2252288(+) (rcrP) [Streptomyces sp. VNUA74]
GTGCTCATACGACTCCTGCGGACCTATCTCAGGCCCTACAAGAAACCCATCGCCCTGCTGGTGGCGCTGCAGTTCCTGCA
GACCTGCGCGTCGCTGTACCTGCCGACCCTGAACGCGGACATCATCGACAACGGTGTCGTGAAGGGTGACTCCGGTTACA
TCCTGGGCTACGGCGCCGTGATGATCGGCATCTCCCTGGCCCAGGTGGTGTGCAACATCGGCGCCGTCTACTACGGCGCG
CGCACGGCCTCCGCCCTCGGACGGGACGTGCGCGGTGCCGTCTTCGACCGGGTGCAGTCCTTCTCGGCGCGCGAGCTGGG
CGGCTTCGGCGCGCCCTCGCTGATCACCCGGACCACCAACGACGTGCAGCAGGTCCAGATGCTGGCCCTGATGACGTTCA
CGCTGATGGTCTCGGCGCCCATCATGTGCGTGGGCGGCATCGTGATGGCACTCGGTCTGGACGTGCCGCTGTCCGGGGTG
CTGGTCGGCGTCGTGCCGGTGCTCGCGGTCTCGGTCACGCTGATCGTGCGGAAGCTGCGCCCGCTGTTCCGGGCGATGCA
GGTGCGGCTGGACACGGTGAACCGGGTACTGCGGGAGCAGATCACCGGCAACCGCGTCATCCGCGCCTTCGTACGGGACG
ACTACGAGCAGGAGCGCTTCCGCAAGGCCAACACCGAGCTCACCGAGGTGGCGCTGGGCACCGGCAACCTGCTCGCGCTG
ATGTTCCCCGTGGTGATGACGGTGGTGAACCTGTCGTCGATCGCCGTGGTGTGGTTCGGCGCCCACCGCATCGACAGCGG
CGGGATGCAGATCGGCGACCTGACCGCGTTCCTCGCCTATCTGATGCAGATCGTCATGTCCGTGATGATGGCCACCTTCA
TGTTCATGATGGTGCCGCGCGCGGAGGTGTGCGCCGAGCGCATCCAGGAGGTCCTGGACACCGAGAGCAGCGTGGTGCCG
CCCCTCGCGCCGGTCACCGAGCTGCGCCGGCACGGGCACCTGGAGATCCGCGGGGCGGGCTTCCGCTATCCGGGGGCCGA
GGAGCCGGTGCTCAGGCACATCGAACTGACCGCGCGGCCGGGCGAGACGACCGCCGTCATCGGCTCGACCGGCAGCGGCA
AGTCGACCCTGCTCGGGCTGGTCCCGCGGCTGTTCGACGCCACCGACGGGGCGGTGCTGGTCGACGGGGTAGACGTGCGG
GACGTCGACCCGAAGGTGCTGGCCCGGATCGTGGGGCTGGTGCCGCAGAAGCCCTACCTCTTCGCGGGCACCGTGGCGAC
CAACCTGCGCTACGGCAATCCGGACGCCACCGACGAGGAGCTGTGGCACGCCCTGGAGGTGGCGCAGGCGAAGGACTTCG
TCGCCGCGCTGGAGGGCGGTCTCGACGCGCCGGTCGCGCAGGGCGGCACCAACGTGTCGGGCGGCCAGCGGCAGCGGCTC
GCCATCGCCCGGACGCTGGTCCAGCGCCCGGAGATCTACCTCTTCGACGACTCCTTCTCCGCGCTCGACTACGCGACCGA
CGCGGCGCTGCGGGCCGAGCTGGGGCGGGAGACGGCCGAGGCGACCGTGGTGATCGTCGCCCAGCGGGTGGCGACCATCC
GGGACGCCGACCGGATCGTGGTGCTGGACGAGGGCCGGGTGGTCGGCGTGGGCCGGCACCACGAGCTGATGGCGGACAAC
GAGACCTACCGGGAGATCGTTCTCTCCCAGCTGACGGAAGCGGAGGCTGCCTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(351-498)

ABC transporter transmembrane region (ABC_membrane)

(19-288)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A191UXI3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.432

97.574

0.385