Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   P1A16_RS13410 Genome accession   NZ_CP119344
Coordinates   2696518..2697405 (-) Length   295 a.a.
NCBI ID   WP_000143426.1    Uniprot ID   -
Organism   Staphylococcus aureus strain N29CSA11     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2691518..2702405
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P1A16_RS13380 (P1A16_13380) - 2691536..2691628 (+) 93 WP_010956583.1 hypothetical protein -
  P1A16_RS13385 (P1A16_13385) - 2691736..2692233 (-) 498 WP_031588419.1 glutathione peroxidase -
  P1A16_RS13390 (P1A16_13390) - 2692243..2692503 (-) 261 WP_001791974.1 hypothetical protein -
  P1A16_RS13395 (P1A16_13395) - 2692885..2692998 (-) 114 WP_072384844.1 hypothetical protein -
  P1A16_RS13400 (P1A16_13400) - 2693657..2695657 (-) 2001 WP_000776753.1 ABC transporter permease -
  P1A16_RS13405 (P1A16_13405) - 2695654..2696409 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  P1A16_RS13410 (P1A16_13410) braS 2696518..2697405 (-) 888 WP_000143426.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  P1A16_RS13415 (P1A16_13415) braR 2697416..2698081 (-) 666 WP_000697877.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  P1A16_RS13420 (P1A16_13420) - 2698107..2698307 (-) 201 WP_000604727.1 hypothetical protein -
  P1A16_RS13425 (P1A16_13425) - 2698505..2699929 (+) 1425 WP_000953747.1 alkaline phosphatase -
  P1A16_RS13430 (P1A16_13430) - 2699999..2700109 (+) 111 Protein_2604 hypothetical protein -
  P1A16_RS13435 (P1A16_13435) - 2700212..2700667 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  P1A16_RS13440 (P1A16_13440) - 2700912..2701673 (-) 762 WP_000323441.1 alpha/beta hydrolase family protein -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34032.32 Da        Isoelectric Point: 5.8962

>NTDB_id=798741 P1A16_RS13410 WP_000143426.1 2696518..2697405(-) (braS) [Staphylococcus aureus strain N29CSA11]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLETALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=798741 P1A16_RS13410 WP_000143426.1 2696518..2697405(-) (braS) [Staphylococcus aureus strain N29CSA11]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAACTGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTTAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAATAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGTCAAAGTAACTCAAGTGGGATTGGCTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

99.661

100

0.997