Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   MT340_RS01540 Genome accession   NZ_CP119327
Coordinates   318510..319406 (+) Length   298 a.a.
NCBI ID   WP_243588471.1    Uniprot ID   -
Organism   Staphylococcus sp. NRL 16/872     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 313510..324406
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MT340_RS01515 (MT340_001515) - 314403..315350 (+) 948 WP_243590216.1 LCP family protein -
  MT340_RS01520 (MT340_001520) - 315457..316926 (-) 1470 WP_243603509.1 alkaline phosphatase -
  MT340_RS01525 (MT340_001525) - 317317..317487 (+) 171 WP_243588468.1 hypothetical protein -
  MT340_RS01530 (MT340_001530) - 317633..317797 (+) 165 WP_243588469.1 hypothetical protein -
  MT340_RS01535 (MT340_001535) braR 317839..318504 (+) 666 WP_243603510.1 response regulator transcription factor Regulator
  MT340_RS01540 (MT340_001540) braS 318510..319406 (+) 897 WP_243588471.1 sensor histidine kinase Regulator
  MT340_RS01545 (MT340_001545) - 319849..320598 (+) 750 WP_243588472.1 ABC transporter ATP-binding protein -
  MT340_RS01550 (MT340_001550) - 320600..322591 (+) 1992 WP_243588473.1 FtsX-like permease family protein -
  MT340_RS01555 (MT340_001555) - 322681..323850 (+) 1170 WP_243588474.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34635.08 Da        Isoelectric Point: 5.4008

>NTDB_id=798472 MT340_RS01540 WP_243588471.1 318510..319406(+) (braS) [Staphylococcus sp. NRL 16/872]
MFKAFMKSILNEIIIVIATILLFLLIFFLFSLPLSAFLLGTAIILFVMIIYWLIQLSGFKEQENMKETITELEEELQQVK
SNQTEYQANVENYFLTWVHQIKTPITASKLLLERNEDNVVNRVRQEVIQIDNYTSLALSYLKLMNEETDMSFSKVTINEL
VRPLIMKYSIQFIDQKTKIHYERCEDEVLTDVQWCSIMIEQILNNALKYARGKDIWIEFNNETKVLSIRDNGVGISQADL
PKIFDKGYSGYNGRLNDQSSGIGLFIVKHISRHLHHKVEVDSELGTGTTFYIHFPQSN

Nucleotide


Download         Length: 897 bp        

>NTDB_id=798472 MT340_RS01540 WP_243588471.1 318510..319406(+) (braS) [Staphylococcus sp. NRL 16/872]
ATGTTCAAAGCATTTATGAAATCGATATTGAATGAAATTATTATTGTGATTGCGACTATATTATTGTTTCTATTAATCTT
CTTTTTATTTAGTTTGCCTTTGAGCGCATTTCTATTAGGTACAGCAATTATTTTATTTGTCATGATTATTTATTGGCTTA
TTCAATTGAGTGGATTTAAAGAACAAGAAAATATGAAAGAAACAATTACGGAACTTGAAGAAGAATTGCAACAAGTTAAG
AGTAATCAAACTGAGTATCAAGCCAATGTGGAGAACTACTTTTTAACATGGGTCCATCAAATCAAGACACCAATTACCGC
TTCGAAATTGTTACTAGAACGCAATGAAGATAATGTGGTTAACCGTGTACGCCAGGAGGTTATTCAAATTGATAACTATA
CAAGCCTCGCCTTAAGTTATTTAAAGTTGATGAATGAAGAAACGGACATGTCCTTTTCCAAAGTAACAATTAATGAACTT
GTGCGTCCCTTAATTATGAAATATTCAATTCAGTTTATTGATCAAAAAACAAAAATTCACTATGAACGTTGTGAAGATGA
GGTGTTAACCGATGTTCAGTGGTGTAGCATTATGATTGAACAAATTCTAAATAATGCATTGAAATATGCTCGAGGAAAAG
ATATTTGGATTGAGTTTAATAACGAAACAAAAGTACTATCGATTCGTGATAATGGTGTTGGAATTAGCCAAGCCGATTTG
CCGAAAATATTTGATAAAGGTTATTCAGGTTATAATGGTCGCCTTAATGACCAATCAAGTGGTATAGGCCTTTTCATCGT
GAAACATATTTCAAGACATCTTCATCATAAAGTCGAGGTCGACTCAGAGCTTGGAACAGGCACAACTTTCTACATTCACT
TCCCACAATCAAACTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

63.356

97.987

0.621