Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   MT340_RS01535 Genome accession   NZ_CP119327
Coordinates   317839..318504 (+) Length   221 a.a.
NCBI ID   WP_243603510.1    Uniprot ID   -
Organism   Staphylococcus sp. NRL 16/872     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 312839..323504
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MT340_RS01510 (MT340_001510) - 313202..314416 (+) 1215 WP_243603508.1 O-antigen ligase family protein -
  MT340_RS01515 (MT340_001515) - 314403..315350 (+) 948 WP_243590216.1 LCP family protein -
  MT340_RS01520 (MT340_001520) - 315457..316926 (-) 1470 WP_243603509.1 alkaline phosphatase -
  MT340_RS01525 (MT340_001525) - 317317..317487 (+) 171 WP_243588468.1 hypothetical protein -
  MT340_RS01530 (MT340_001530) - 317633..317797 (+) 165 WP_243588469.1 hypothetical protein -
  MT340_RS01535 (MT340_001535) braR 317839..318504 (+) 666 WP_243603510.1 response regulator transcription factor Regulator
  MT340_RS01540 (MT340_001540) braS 318510..319406 (+) 897 WP_243588471.1 sensor histidine kinase Regulator
  MT340_RS01545 (MT340_001545) - 319849..320598 (+) 750 WP_243588472.1 ABC transporter ATP-binding protein -
  MT340_RS01550 (MT340_001550) - 320600..322591 (+) 1992 WP_243588473.1 FtsX-like permease family protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25618.45 Da        Isoelectric Point: 4.8439

>NTDB_id=798471 MT340_RS01535 WP_243603510.1 317839..318504(+) (braR) [Staphylococcus sp. NRL 16/872]
MKVLIVEDDLVIAESLEHELSQWNYEVVVAKQFDNILDLFNTHQPQLVLLDINLPTFNGYHWCQEIRKTSNVPIIFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVAKIQALLRRTYDLAVSNNEIIVHDCKLIIDEATLYHNDESVQLSFTELQILH
MLFRNEGKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLQSIGVKDLIETKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=798471 MT340_RS01535 WP_243603510.1 317839..318504(+) (braR) [Staphylococcus sp. NRL 16/872]
ATGAAAGTCCTTATTGTGGAAGATGACTTAGTGATTGCAGAAAGCTTAGAACATGAGCTATCTCAATGGAATTATGAAGT
AGTTGTAGCAAAACAATTTGATAATATTCTTGATTTATTTAACACTCATCAACCGCAACTTGTATTGTTAGATATCAATT
TACCAACATTTAATGGTTACCACTGGTGCCAAGAAATTCGAAAGACGTCGAATGTGCCGATTATCTTCATTAGTTCGCGC
ACGGATAATATGGATCAGATTATGGCGATTCAAATGGGTGGCGATGATTTCATCGAGAAACCATTCAACTTATCTTTAAC
TGTGGCGAAGATTCAAGCGTTGCTACGTCGAACATATGATTTAGCCGTTTCTAATAATGAAATTATTGTACATGATTGTA
AGTTGATTATTGATGAAGCGACACTTTACCATAATGATGAATCTGTGCAATTATCTTTCACAGAACTTCAAATCTTGCAT
ATGCTATTTCGCAATGAAGGTAAATATGTCAGCCGTACAGCTTTAATTGAAAAGTGCTGGGAATCTGAAAATTTTATTGA
TGACAATACACTTGCCGTGAATATGACACGTTTGCGTAAGAAGTTACAATCCATTGGCGTGAAAGATTTAATAGAAACGA
AGAAAAATGTTGGGTATAAGGTGTAA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

78.733

100

0.787