Detailed information
Bioinformatically predicted
Overview
| Name | comC | Type | Machinery gene |
| Locus tag | PY247_RS07370 | Genome accession | NZ_CP119223 |
| Coordinates | 1558738..1559811 (+) | Length | 357 a.a. |
| NCBI ID | WP_275573886.1 | Uniprot ID | - |
| Organism | Acinetobacter proteolyticus strain AP54 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1553738..1564811
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PY247_RS07340 (PY247_07340) | pilV | 1553970..1554458 (+) | 489 | WP_004657488.1 | type IV pilus modification protein PilV | Machinery gene |
| PY247_RS07345 (PY247_07345) | - | 1554459..1555471 (+) | 1013 | Protein_1421 | PilW family protein | - |
| PY247_RS07350 (PY247_07350) | - | 1555479..1556244 (+) | 766 | Protein_1422 | pilus assembly PilX N-terminal domain-containing protein | - |
| PY247_RS07355 (PY247_07355) | - | 1556258..1556671 (+) | 414 | WP_275573883.1 | hypothetical protein | - |
| PY247_RS07360 (PY247_07360) | - | 1556695..1557420 (+) | 726 | WP_275573884.1 | hypothetical protein | - |
| PY247_RS07365 (PY247_07365) | - | 1557495..1558541 (+) | 1047 | WP_275573885.1 | hypothetical protein | - |
| PY247_RS07370 (PY247_07370) | comC | 1558738..1559811 (+) | 1074 | WP_275573886.1 | hypothetical protein | Machinery gene |
| PY247_RS07375 (PY247_07375) | - | 1559751..1560512 (+) | 762 | WP_275573887.1 | hypothetical protein | - |
| PY247_RS07380 (PY247_07380) | - | 1560496..1561077 (+) | 582 | WP_275573888.1 | type IV pilin protein | - |
| PY247_RS07385 (PY247_07385) | rpsP | 1561241..1561498 (+) | 258 | WP_004657497.1 | 30S ribosomal protein S16 | - |
| PY247_RS07390 (PY247_07390) | rimM | 1561515..1562063 (+) | 549 | WP_004657498.1 | ribosome maturation factor RimM | - |
| PY247_RS07395 (PY247_07395) | trmD | 1562109..1562849 (+) | 741 | WP_275573889.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| PY247_RS07400 (PY247_07400) | rplS | 1563043..1563414 (+) | 372 | WP_004657502.1 | 50S ribosomal protein L19 | - |
| PY247_RS07405 (PY247_07405) | truB | 1563552..1564445 (+) | 894 | WP_275573890.1 | tRNA pseudouridine(55) synthase TruB | - |
Sequence
Protein
Download Length: 357 a.a. Molecular weight: 39158.61 Da Isoelectric Point: 5.1918
>NTDB_id=798219 PY247_RS07370 WP_275573886.1 1558738..1559811(+) (comC) [Acinetobacter proteolyticus strain AP54]
MSLLGYQLDNPESATGNSLTQSEPLWQVGMSLHSTPLKLTQYAKFDTNKIARDDYIAFGSTQGLLHVVDADDGTEKFAFV
PNEMLENAEQRKAFVKDRKGYWPDMPYGIDGAWTAYTEYAYGMGSDGKVYATVQQAKNKDIVIATGKQTLYGGLRMGGRS
YYALNLADLDKPEIKFHIDPNTGKVYSAANPAGQAFSAIENMGQSWSKPTIAYVNWKGQRKQVMFVGGGYDASGTVACAE
SETGVSLSAYSNKGYECPTYNQTNKQGAGVYMFDADNGDLLWWASSSATTKNDTAKENALNVTNMDYSVVSRISVADRDG
NGLVDHLYFGDLGGRFGEWISMPIQQQVILHNARHVS
MSLLGYQLDNPESATGNSLTQSEPLWQVGMSLHSTPLKLTQYAKFDTNKIARDDYIAFGSTQGLLHVVDADDGTEKFAFV
PNEMLENAEQRKAFVKDRKGYWPDMPYGIDGAWTAYTEYAYGMGSDGKVYATVQQAKNKDIVIATGKQTLYGGLRMGGRS
YYALNLADLDKPEIKFHIDPNTGKVYSAANPAGQAFSAIENMGQSWSKPTIAYVNWKGQRKQVMFVGGGYDASGTVACAE
SETGVSLSAYSNKGYECPTYNQTNKQGAGVYMFDADNGDLLWWASSSATTKNDTAKENALNVTNMDYSVVSRISVADRDG
NGLVDHLYFGDLGGRFGEWISMPIQQQVILHNARHVS
Nucleotide
Download Length: 1074 bp
>NTDB_id=798219 PY247_RS07370 WP_275573886.1 1558738..1559811(+) (comC) [Acinetobacter proteolyticus strain AP54]
ATGAGTCTTTTGGGCTATCAGTTAGATAATCCCGAAAGTGCAACAGGAAATAGCCTTACTCAAAGCGAACCACTTTGGCA
AGTGGGTATGTCACTGCATTCTACGCCATTAAAACTGACTCAATATGCTAAGTTTGATACGAATAAAATTGCTCGGGATG
ACTACATTGCTTTTGGTTCAACTCAAGGTTTATTACATGTCGTGGATGCTGACGATGGCACAGAGAAATTTGCTTTTGTA
CCAAATGAAATGCTGGAAAATGCTGAGCAAAGAAAAGCATTTGTAAAAGACCGTAAAGGTTATTGGCCTGATATGCCGTA
TGGGATAGACGGTGCGTGGACCGCTTATACCGAATATGCCTATGGTATGGGTAGTGATGGCAAAGTTTATGCAACTGTTC
AGCAAGCAAAGAATAAAGATATTGTCATCGCAACAGGAAAACAAACTTTATATGGTGGTTTGCGTATGGGAGGGCGTAGT
TATTATGCACTTAACCTTGCAGATCTAGACAAGCCCGAAATCAAATTCCATATCGATCCAAATACAGGCAAAGTTTATTC
AGCAGCAAATCCGGCAGGGCAAGCATTCTCAGCAATCGAGAATATGGGGCAAAGTTGGTCTAAGCCTACAATTGCTTATG
TCAATTGGAAAGGACAACGTAAACAAGTGATGTTTGTAGGAGGTGGCTATGATGCCTCAGGGACGGTTGCTTGTGCTGAG
TCGGAAACAGGTGTGAGTTTATCTGCTTATAGTAACAAGGGGTATGAGTGCCCAACATATAACCAAACCAATAAACAAGG
TGCAGGAGTTTATATGTTTGATGCTGATAATGGTGATTTATTATGGTGGGCAAGTTCAAGTGCAACAACTAAAAATGATA
CTGCAAAAGAGAATGCTTTAAATGTAACGAATATGGATTATAGCGTTGTCAGTCGTATCAGTGTCGCTGATCGTGATGGC
AATGGTTTAGTTGATCATTTGTATTTTGGTGACTTAGGGGGCAGGTTTGGCGAGTGGATATCAATGCCAATACAACAACA
GGTGATTTTGCACAACGCGCGACACGTATCTTAA
ATGAGTCTTTTGGGCTATCAGTTAGATAATCCCGAAAGTGCAACAGGAAATAGCCTTACTCAAAGCGAACCACTTTGGCA
AGTGGGTATGTCACTGCATTCTACGCCATTAAAACTGACTCAATATGCTAAGTTTGATACGAATAAAATTGCTCGGGATG
ACTACATTGCTTTTGGTTCAACTCAAGGTTTATTACATGTCGTGGATGCTGACGATGGCACAGAGAAATTTGCTTTTGTA
CCAAATGAAATGCTGGAAAATGCTGAGCAAAGAAAAGCATTTGTAAAAGACCGTAAAGGTTATTGGCCTGATATGCCGTA
TGGGATAGACGGTGCGTGGACCGCTTATACCGAATATGCCTATGGTATGGGTAGTGATGGCAAAGTTTATGCAACTGTTC
AGCAAGCAAAGAATAAAGATATTGTCATCGCAACAGGAAAACAAACTTTATATGGTGGTTTGCGTATGGGAGGGCGTAGT
TATTATGCACTTAACCTTGCAGATCTAGACAAGCCCGAAATCAAATTCCATATCGATCCAAATACAGGCAAAGTTTATTC
AGCAGCAAATCCGGCAGGGCAAGCATTCTCAGCAATCGAGAATATGGGGCAAAGTTGGTCTAAGCCTACAATTGCTTATG
TCAATTGGAAAGGACAACGTAAACAAGTGATGTTTGTAGGAGGTGGCTATGATGCCTCAGGGACGGTTGCTTGTGCTGAG
TCGGAAACAGGTGTGAGTTTATCTGCTTATAGTAACAAGGGGTATGAGTGCCCAACATATAACCAAACCAATAAACAAGG
TGCAGGAGTTTATATGTTTGATGCTGATAATGGTGATTTATTATGGTGGGCAAGTTCAAGTGCAACAACTAAAAATGATA
CTGCAAAAGAGAATGCTTTAAATGTAACGAATATGGATTATAGCGTTGTCAGTCGTATCAGTGTCGCTGATCGTGATGGC
AATGGTTTAGTTGATCATTTGTATTTTGGTGACTTAGGGGGCAGGTTTGGCGAGTGGATATCAATGCCAATACAACAACA
GGTGATTTTGCACAACGCGCGACACGTATCTTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comC | Acinetobacter baylyi ADP1 |
56.322 |
97.479 |
0.549 |