Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   L6477_RS20435 Genome accession   NZ_AP022886
Coordinates   3960367..3961161 (-) Length   264 a.a.
NCBI ID   WP_003161566.1    Uniprot ID   P52928
Organism   Bacillus cereus strain MRY14-0074     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 3955367..3966161
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L6477_RS20410 (BCM0074_4042) - 3956194..3956436 (-) 243 WP_236797205.1 hypothetical protein -
  L6477_RS20415 (BCM0074_4043) - 3956996..3957295 (-) 300 WP_236797206.1 hypothetical protein -
  L6477_RS20420 (BCM0074_4045) - 3957696..3957875 (-) 180 WP_236797207.1 hypothetical protein -
  L6477_RS20425 (BCM0074_4046) - 3957877..3958239 (-) 363 WP_236797208.1 GIY-YIG nuclease family protein -
  L6477_RS20430 (BCM0074_4047) - 3959239..3960213 (-) 975 WP_236797209.1 tyrosine-type recombinase/integrase -
  L6477_RS20435 (BCM0074_4048) spo0A 3960367..3961161 (-) 795 WP_003161566.1 sporulation transcription factor Spo0A Regulator
  L6477_RS20440 (BCM0074_4049) spoIVB 3961449..3962747 (-) 1299 WP_002054681.1 SpoIVB peptidase -
  L6477_RS20445 (BCM0074_4050) recN 3962866..3964605 (-) 1740 WP_000947754.1 DNA repair protein RecN Machinery gene
  L6477_RS20450 (BCM0074_4051) argR 3964872..3965321 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29440.17 Da        Isoelectric Point: 7.4718

>NTDB_id=79761 L6477_RS20435 WP_003161566.1 3960367..3961161(-) (spo0A) [Bacillus cereus strain MRY14-0074]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=79761 L6477_RS20435 WP_003161566.1 3960367..3961161(-) (spo0A) [Bacillus cereus strain MRY14-0074]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTCG
TATTGGATATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAAAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAGGCGAACGCTACTATTAAACGTCCAC
TGCCATCTTTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAATTTAGACGCGAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTACATGTACTTAAGGGAAGCAATTTCTATGGTGTACAATGACATCGAATTACT
TGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGCCGCGTTGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCTGAGTTCATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAGGCTTCGTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P52928

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818

Multiple sequence alignment