Detailed information NTG0797505

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: PZB78_RS15465
• Genome accession: NZ_CP119073
• Coordinates: 3007406..3008563 (-)
• Length: 385 a.a.
• NCBI ID: WP_024123030.1
• Uniprot ID: A0A9Q6F2U6
• Organism: Bacillus halotolerans strain SW207
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3002406..3013563

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PZB78_RS15435 (PZB78_15425)	-	3002667..3003086 (-)	420	WP_024123026.1	TIGR03826 family flagellar region protein	-
PZB78_RS15440 (PZB78_15430)	comFC	3003160..3003882 (-)	723	WP_142396176.1	double zinc ribbon domain-containing protein	Machinery gene
PZB78_RS15445 (PZB78_15435)	-	3003846..3004142 (-)	297	WP_024123028.1	late competence development ComFB family protein	-
PZB78_RS15450 (PZB78_15440)	comFA	3004188..3005585 (-)	1398	WP_106021953.1	ATP-dependent helicase ComFA	Machinery gene
PZB78_RS15455 (PZB78_15445)	-	3005692..3006537 (-)	846	WP_106019639.1	DegV family protein	-
PZB78_RS15460 (PZB78_15450)	degU	3006634..3007323 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
PZB78_RS15465 (PZB78_15455)	degS	3007406..3008563 (-)	1158	WP_024123030.1	two-component sensor histidine kinase DegS	Regulator
PZB78_RS15470 (PZB78_15460)	-	3008780..3009433 (+)	654	WP_044159478.1	YigZ family protein	-
PZB78_RS15475 (PZB78_15465)	-	3009433..3010611 (+)	1179	WP_024123032.1	LCP family protein	-
PZB78_RS15480 (PZB78_15470)	-	3010683..3011759 (-)	1077	WP_151174552.1	glycosyltransferase family 4 protein	-
PZB78_RS15485 (PZB78_15475)	tuaH	3011903..3013093 (-)	1191	WP_106019940.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44871.71 Da
• Isoelectric Point: 6.7798

>NTDB_id=797505 PZB78_RS15465 WP_024123030.1 3007406..3008563(-) (degS) [Bacillus halotolerans strain SW207]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTEDKRLAPQFEVALFRLAQEAVSNALKHSGSEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=797505 PZB78_RS15465 WP_024123030.1 3007406..3008563(-) (degS) [Bacillus halotolerans strain SW207]
ATGAATAAAACAAAGATGGATTCCAAAGTTCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
TGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TTTATGAAGTCATCGAGCTTGGTGATAAACTTGAAGTGCAAACCCGTCATGCGCGAAACCGTTTATCCGAGGTCAGCCGC
AATTTTCATAGATTCAGTGAAGAAGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAAGTAGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAATTGCGCGAACGCCGGGACGATTTGGAACGCAGACTGCTAGGACTTCAGGAAATCATCGAAC
GCTCAGAATCACTAGTGAGCCAGATTACGGTCGTGCTGAACTATCTGAATCAGGATCTTCGGGAGGTTGGGCTGCTTCTT
GCCGATGCGCAGGCAAAACAGGATTTTGGCTTGAGAATTATTGAAGCGCAGGAAGAAGAGAGAAAAAGAGTCTCGAGAGA
AATTCACGACGGTCCTGCACAAATGCTGGCAAATGTTATGATGAGATCAGAATTAATTGAACGGATTTTCCGAGACCGAG
GCGCTGAAGACGGATTCCAGGAAATCAAAAATCTCCGACAAAATGTGCGGAATGCTCTTTACGAAGTGAGACGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTGCGGAAATATCTATATACAACCGAAGAATA
TAACGGTAAGGTGAAAATACATTTTCAGTGCATCGGCGATACGGAGGACAAACGACTCGCGCCTCAGTTTGAAGTTGCGC
TCTTCAGACTCGCACAGGAAGCTGTATCCAATGCGTTAAAGCATTCTGGATCTGAAGAAATTACAGTCAAAGTTGAGATT
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGCAAAGGATTTGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTTGGAATGAAAGAAAGAGTAGATTTATTGGAAGGAACCATGACAATAGATTCAAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	99.221	100	0.992