Detailed information NTG0797148

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: PYW44_RS06530
• Genome accession: NZ_CP118982
• Coordinates: 1338779..1339753 (+)
• Length: 324 a.a.
• NCBI ID: WP_021339253.1
• Uniprot ID: -
• Organism: Staphylococcus equorum strain DSM 20674
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1333779..1344753

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PYW44_RS06500	-	1333960..1334499 (+)	540	WP_021339257.1	5-formyltetrahydrofolate cyclo-ligase	-
PYW44_RS06505	-	1334514..1335971 (+)	1458	WP_021339256.1	rhomboid family protein	-
PYW44_RS06510	-	1335955..1336155 (+)	201	WP_002512453.1	YqgQ family protein	-
PYW44_RS06515	-	1336745..1337731 (+)	987	WP_021339255.1	glucokinase	-
PYW44_RS06520	-	1337731..1338054 (+)	324	WP_021339254.1	MTH1187 family thiamine-binding protein	-
PYW44_RS06525	-	1338056..1338679 (+)	624	WP_002507502.1	MBL fold metallo-hydrolase	-
PYW44_RS06530	comGA	1338779..1339753 (+)	975	WP_021339253.1	competence type IV pilus ATPase ComGA	Machinery gene
PYW44_RS06535	comGB	1339737..1340792 (+)	1056	WP_275113467.1	competence type IV pilus assembly protein ComGB	-
PYW44_RS06540	comGC	1340817..1341134 (+)	318	WP_031265988.1	competence type IV pilus major pilin ComGC	Machinery gene
PYW44_RS06545	comGD	1341112..1341558 (+)	447	WP_064782888.1	competence type IV pilus minor pilin ComGD	-
PYW44_RS06550	comGF	1341545..1342258 (+)	714	WP_021339249.1	competence type IV pilus minor pilin ComGF	-
PYW44_RS06555	-	1342465..1342938 (+)	474	WP_236593604.1	shikimate kinase	-
PYW44_RS06560	gcvT	1343117..1344208 (+)	1092	WP_021339246.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37344.44 Da
• Isoelectric Point: 9.0566

>NTDB_id=797148 PYW44_RS06530 WP_021339253.1 1338779..1339753(+) (comGA) [Staphylococcus equorum strain DSM 20674]
MKLLFNNIIEKAIQRNATDIHFIPSEKEVYIKFRIQDDLTFIESIRTHVYRKLLTYMKYQAGLDVSKHNSAQSGRYIYKL
KQIFYLRISTLPLSLGNESCVVRIIPQYFQKQNITHDIEKLYTLMNKKQGLILFSGPTGSGKSTLMYQMVMYAKEKLGLN
IITVEDPVEQLVEGVTQVSINEKAGINYESSFKAILRCDPDIILIGEVRDPTIAKYVIQASLSGHLVLTTIHANNCKGAL
LRLLEMGITKQEINQSILSVLNQRLITIYNSERKLIYEQLLQHDISYFLNNDYTLPNHFHNLSFHLKQMSKAGVICEETV
DRYI

Nucleotide

• Length: 975 bp

>NTDB_id=797148 PYW44_RS06530 WP_021339253.1 1338779..1339753(+) (comGA) [Staphylococcus equorum strain DSM 20674]
TTGAAGCTATTATTTAACAACATAATTGAGAAAGCAATTCAGAGAAATGCTACTGATATACACTTTATACCTTCTGAAAA
GGAAGTGTATATCAAATTTAGAATTCAGGATGATTTAACTTTTATTGAATCAATTCGGACACATGTTTATAGAAAGCTGC
TTACTTATATGAAATATCAAGCTGGATTAGATGTATCAAAACATAATTCGGCACAAAGTGGAAGATACATATATAAACTA
AAACAAATATTTTATTTAAGAATCTCTACGTTACCATTGTCTCTCGGTAATGAAAGTTGTGTTGTAAGAATCATTCCTCA
ATATTTTCAAAAGCAAAATATCACTCATGATATTGAAAAACTGTATACATTAATGAATAAAAAGCAAGGTTTAATACTAT
TTAGCGGTCCAACTGGATCTGGTAAAAGTACTTTAATGTATCAAATGGTTATGTATGCAAAGGAAAAGTTAGGTTTAAAT
ATCATAACTGTAGAAGATCCGGTGGAACAATTAGTTGAGGGCGTTACTCAAGTTTCTATCAATGAAAAGGCAGGTATTAA
TTATGAGAGTTCTTTTAAGGCAATACTAAGGTGTGATCCAGACATTATACTTATTGGAGAAGTTAGAGATCCTACGATAG
CAAAATACGTTATACAAGCAAGTTTAAGTGGTCACTTAGTATTAACTACAATACATGCTAACAATTGTAAGGGCGCGTTA
TTAAGATTATTAGAAATGGGCATAACAAAACAAGAAATTAACCAATCTATTTTGAGTGTGTTAAACCAAAGACTAATCAC
AATATATAACAGTGAAAGAAAATTAATTTATGAACAGTTACTACAACACGATATAAGTTATTTTTTAAATAATGATTACA
CATTACCAAACCATTTTCATAATTTATCCTTTCATTTAAAGCAAATGTCTAAAGCAGGTGTTATTTGTGAAGAAACTGTT
GATCGCTATATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	61.111	100	0.611
comGA	Staphylococcus aureus N315	61.111	100	0.611