Detailed information NTG0797116

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: PYW40_RS06450
• Genome accession: NZ_CP118979
• Coordinates: 1322929..1323903 (+)
• Length: 324 a.a.
• NCBI ID: WP_011275668.1
• Uniprot ID: -
• Organism: Staphylococcus haemolyticus strain DSM 20263
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1317929..1328903

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PYW40_RS06415	rpmG	1318361..1318510 (+)	150	WP_057504820.1	50S ribosomal protein L33	-
PYW40_RS06420	-	1318747..1319283 (+)	537	WP_011275662.1	5-formyltetrahydrofolate cyclo-ligase	-
PYW40_RS06425	-	1319299..1320756 (+)	1458	WP_011275663.1	rhomboid family protein	-
PYW40_RS06430	-	1320740..1320943 (+)	204	WP_011275664.1	YqgQ family protein	-
PYW40_RS06435	-	1320940..1321926 (+)	987	WP_037558191.1	ROK family glucokinase	-
PYW40_RS06440	-	1321926..1322249 (+)	324	WP_011275666.1	MTH1187 family thiamine-binding protein	-
PYW40_RS06445	-	1322251..1322877 (+)	627	WP_011275667.1	MBL fold metallo-hydrolase	-
PYW40_RS06450	comGA	1322929..1323903 (+)	975	WP_011275668.1	competence type IV pilus ATPase ComGA	Machinery gene
PYW40_RS06455	comGB	1323875..1324939 (+)	1065	WP_037558195.1	competence type IV pilus assembly protein ComGB	-
PYW40_RS06460	comGC	1324953..1325273 (+)	321	WP_057504819.1	competence type IV pilus major pilin ComGC	Machinery gene
PYW40_RS06465	comGD	1325338..1325706 (+)	369	WP_123955564.1	competence type IV pilus minor pilin ComGD	-
PYW40_RS06470	-	1325687..1325986 (+)	300	WP_037558199.1	hypothetical protein	-
PYW40_RS12625	-	1325925..1326395 (+)	471	WP_046464809.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
PYW40_RS06475	-	1326555..1327073 (+)	519	WP_037558203.1	shikimate kinase	-
PYW40_RS06480	gcvT	1327262..1328353 (+)	1092	WP_011275675.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37137.14 Da
• Isoelectric Point: 8.6557

>NTDB_id=797116 PYW40_RS06450 WP_011275668.1 1322929..1323903(+) (comGA) [Staphylococcus haemolyticus strain DSM 20263]
MKLLFREIVNKAISKNASDIHFIPTVDEVHIKFRINDYLELYEIFNLDVYQKLLVFMKFKSGLDVSSHQSAQSGRYTYQA
KSTFYLRISTLPLSLGIESCVIRIIPQYFQAKKEYKEFNDFKHLVNKKQGLILLTGPTGSGKSTLMYQMVLHAYKELNLN
VITIENPVEQLLKGITQISINKKAGIDYVSSFKAILRCDPDIILIGEIRDAEVAKCVIQASLSGHLVLSTMHSTNCRGAL
LRLLEMGISIQELTQSINIISNQRLITTTQNERRLICETIDKKQIQFFFEHEQTMPHNFNNLQQQLNLLSKEGTICEDTA
SKYF

Nucleotide

• Length: 975 bp

>NTDB_id=797116 PYW40_RS06450 WP_011275668.1 1322929..1323903(+) (comGA) [Staphylococcus haemolyticus strain DSM 20263]
TTGAAACTATTATTCAGAGAGATAGTTAATAAAGCTATTTCAAAAAATGCGAGTGACATACATTTTATTCCTACAGTTGA
TGAAGTTCATATTAAATTTAGAATTAATGATTACCTTGAACTTTATGAAATATTCAACTTAGATGTATATCAAAAATTAT
TAGTATTTATGAAGTTCAAATCAGGTTTGGACGTTTCATCTCATCAATCCGCTCAAAGTGGTCGTTATACTTATCAAGCT
AAATCTACTTTTTATTTACGGATTTCAACATTACCTTTGTCTTTAGGTATAGAAAGTTGTGTAATTAGGATAATTCCTCA
ATATTTTCAAGCAAAAAAAGAATATAAAGAATTTAACGATTTTAAACACTTAGTAAATAAAAAACAGGGATTAATTCTAT
TAACTGGACCCACAGGATCCGGAAAAAGCACTCTGATGTATCAAATGGTTCTACATGCATATAAAGAATTAAATCTTAAT
GTCATCACTATCGAAAACCCAGTTGAGCAATTACTAAAGGGAATTACTCAAATATCAATTAATAAAAAAGCAGGTATCGA
CTACGTAAGTTCATTTAAAGCTATATTAAGATGTGATCCTGATATTATTTTAATAGGTGAAATAAGAGACGCAGAAGTTG
CTAAATGTGTAATTCAAGCTAGTTTGAGTGGACATCTTGTATTATCAACTATGCATTCCACTAATTGTAGAGGTGCATTA
CTTCGATTACTTGAGATGGGAATTTCAATTCAAGAATTAACTCAATCGATCAATATCATTTCTAATCAAAGATTAATAAC
GACTACTCAGAATGAGCGTCGCTTAATTTGTGAAACAATAGATAAAAAGCAGATACAATTTTTCTTCGAGCATGAACAAA
CAATGCCACATAATTTTAATAATTTACAACAGCAATTAAATTTATTATCTAAAGAAGGAACAATTTGTGAAGATACTGCA
AGTAAATATTTTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (8-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	65.325	99.691	0.651
comGA	Staphylococcus aureus N315	65.325	99.691	0.651