Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   PYW40_RS01565 Genome accession   NZ_CP118979
Coordinates   352734..353630 (+) Length   298 a.a.
NCBI ID   WP_057504854.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain DSM 20263     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 347734..358630
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PYW40_RS01540 - 348614..349549 (+) 936 WP_057504855.1 LCP family protein -
  PYW40_RS01545 - 349639..351114 (-) 1476 WP_049395422.1 alkaline phosphatase -
  PYW40_RS01550 - 351513..351683 (+) 171 WP_169301455.1 hypothetical protein -
  PYW40_RS01555 - 351869..352033 (+) 165 WP_011274729.1 hypothetical protein -
  PYW40_RS01560 braR 352063..352731 (+) 669 WP_033079694.1 response regulator transcription factor Regulator
  PYW40_RS01565 braS 352734..353630 (+) 897 WP_057504854.1 sensor histidine kinase Regulator
  PYW40_RS01570 - 353811..354560 (+) 750 WP_016930644.1 ABC transporter ATP-binding protein -
  PYW40_RS01575 - 354562..356553 (+) 1992 WP_037570978.1 ABC transporter permease -
  PYW40_RS01580 - 356642..357814 (+) 1173 WP_057504853.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34579.19 Da        Isoelectric Point: 6.6935

>NTDB_id=797101 PYW40_RS01565 WP_057504854.1 352734..353630(+) (braS) [Staphylococcus haemolyticus strain DSM 20263]
MLKAFIKSILNEIIIVITCILLFLLIFFLFNLPLSAFLLGAGIMLFIMIIYWLVQLSGFKEQVQMADTIHELEHELQQVK
SDQTEYQANVENYFLTWVHQMKTPITASKLLLERNEDNVVNRVRQEIIQIDNYTSLALSYLKLMNQETDMSFSKVKINDI
VRPLIMKYSIQFIDQKTKIHYERCENEILTDAQWCSIMIEQILNNALKYARGKDIWIAFDQQQQVLTIRDNGVGISQADL
PKIFDKGYSGYNGRLNANSSGIGLFIVKHISQHLHHYVDVQSELNKGTAFSIYFPKNN

Nucleotide


Download         Length: 897 bp        

>NTDB_id=797101 PYW40_RS01565 WP_057504854.1 352734..353630(+) (braS) [Staphylococcus haemolyticus strain DSM 20263]
ATGCTGAAAGCTTTTATTAAATCGATATTAAATGAAATCATTATAGTTATTACATGTATATTATTATTCTTACTTATCTT
CTTTCTATTTAATCTGCCATTGAGTGCGTTTCTATTAGGCGCCGGAATTATGCTATTCATCATGATAATTTATTGGTTAG
TTCAATTAAGTGGATTTAAAGAACAAGTACAGATGGCAGATACTATTCATGAACTAGAGCATGAATTGCAACAGGTGAAA
AGTGATCAAACGGAATATCAAGCTAATGTGGAGAATTACTTCTTAACGTGGGTTCATCAAATGAAGACACCTATTACAGC
ATCTAAATTATTACTAGAGCGTAATGAAGATAATGTCGTTAATCGCGTGCGTCAAGAAATTATTCAAATTGATAATTATA
CAAGTTTAGCGTTAAGTTATTTAAAATTGATGAACCAGGAAACGGATATGTCCTTTTCAAAAGTGAAAATTAACGATATT
GTTCGTCCATTAATCATGAAATATTCTATTCAATTTATTGATCAGAAGACGAAAATCCATTATGAACGTTGTGAAAATGA
GATTCTGACGGATGCACAATGGTGTTCAATAATGATTGAACAAATTCTTAATAATGCATTGAAGTATGCACGGGGCAAAG
ATATTTGGATTGCGTTTGACCAACAACAGCAAGTATTGACTATTCGTGATAATGGCGTCGGAATTAGTCAAGCTGACTTA
CCGAAGATCTTTGATAAAGGCTATTCAGGATATAATGGTCGATTGAATGCTAATTCATCAGGCATTGGATTGTTTATTGT
TAAACATATCTCTCAACATTTACATCATTATGTAGATGTACAGTCTGAGTTGAACAAAGGTACGGCATTTAGTATTTATT
TTCCGAAAAATAATTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

63.014

97.987

0.617