Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   PYW40_RS01560 Genome accession   NZ_CP118979
Coordinates   352063..352731 (+) Length   222 a.a.
NCBI ID   WP_033079694.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain DSM 20263     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 347063..357731
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PYW40_RS01535 - 347460..348593 (+) 1134 WP_033079691.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  PYW40_RS01540 - 348614..349549 (+) 936 WP_057504855.1 LCP family protein -
  PYW40_RS01545 - 349639..351114 (-) 1476 WP_049395422.1 alkaline phosphatase -
  PYW40_RS01550 - 351513..351683 (+) 171 WP_169301455.1 hypothetical protein -
  PYW40_RS01555 - 351869..352033 (+) 165 WP_011274729.1 hypothetical protein -
  PYW40_RS01560 braR 352063..352731 (+) 669 WP_033079694.1 response regulator transcription factor Regulator
  PYW40_RS01565 braS 352734..353630 (+) 897 WP_057504854.1 sensor histidine kinase Regulator
  PYW40_RS01570 - 353811..354560 (+) 750 WP_016930644.1 ABC transporter ATP-binding protein -
  PYW40_RS01575 - 354562..356553 (+) 1992 WP_037570978.1 ABC transporter permease -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25615.42 Da        Isoelectric Point: 4.5713

>NTDB_id=797100 PYW40_RS01560 WP_033079694.1 352063..352731(+) (braR) [Staphylococcus haemolyticus strain DSM 20263]
MKVFIVEDDFVIAESLEQELSKWNYEVIVAKQFDNIIDVFNANQPQLVLLDINLPTFNGYHWCQEIRKTSNVPIMFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVTKIQALLRRTYDLAVSNNEITVKDCKLVVDEATLYHEGESVQLSFTELQILN
MLFRNEGKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLQSIGVVDLIETKKNVGYKVS

Nucleotide


Download         Length: 669 bp        

>NTDB_id=797100 PYW40_RS01560 WP_033079694.1 352063..352731(+) (braR) [Staphylococcus haemolyticus strain DSM 20263]
ATGAAAGTATTCATCGTGGAAGATGATTTTGTCATTGCAGAAAGTTTAGAGCAAGAGTTATCGAAATGGAATTATGAGGT
CATCGTGGCTAAACAATTTGATAATATTATCGACGTATTTAATGCAAATCAACCACAACTCGTGTTGCTCGATATCAATC
TACCGACATTCAATGGCTATCACTGGTGTCAGGAGATACGTAAGACTTCTAATGTGCCGATTATGTTTATTAGTTCAAGA
ACCGACAATATGGATCAAATTATGGCAATTCAAATGGGCGGCGATGATTTTATCGAGAAACCATTTAATTTATCGTTAAC
GGTAACTAAGATTCAAGCATTATTACGGAGAACGTATGATTTAGCAGTGTCTAATAATGAAATTACTGTTAAAGATTGCA
AACTTGTTGTAGATGAAGCAACACTTTACCATGAAGGCGAATCGGTTCAATTGTCCTTTACTGAATTACAAATTTTAAAT
ATGTTGTTCCGTAATGAGGGTAAGTATGTTAGCCGTACCGCATTGATTGAGAAGTGTTGGGAGTCTGAGAATTTTATAGA
TGACAATACTTTAGCGGTCAATATGACACGATTGCGTAAGAAATTACAATCGATAGGTGTTGTAGATTTAATTGAAACTA
AGAAGAATGTGGGATATAAGGTGTCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(146-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

78.281

99.55

0.779