Detailed information NTG0797080

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: PYW31_RS06615
• Genome accession: NZ_CP118976
• Coordinates: 1348529..1349503 (+)
• Length: 324 a.a.
• NCBI ID: WP_046836544.1
• Uniprot ID: -
• Organism: Staphylococcus succinus strain DSM 14617
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1343529..1354503

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PYW31_RS06585	-	1343646..1344188 (+)	543	WP_046836549.1	5-formyltetrahydrofolate cyclo-ligase	-
PYW31_RS06590	-	1344200..1345657 (+)	1458	WP_046836548.1	rhomboid family intramembrane serine protease	-
PYW31_RS06595	-	1345641..1345841 (+)	201	WP_046836828.1	YqgQ family protein	-
PYW31_RS06600	-	1346461..1347447 (+)	987	WP_046836547.1	glucokinase	-
PYW31_RS06605	-	1347447..1347770 (+)	324	WP_046836546.1	MTH1187 family thiamine-binding protein	-
PYW31_RS06610	-	1347772..1348395 (+)	624	WP_046836545.1	MBL fold metallo-hydrolase	-
PYW31_RS06615	comGA	1348529..1349503 (+)	975	WP_046836544.1	competence type IV pilus ATPase ComGA	Machinery gene
PYW31_RS06620	comGB	1349475..1350542 (+)	1068	WP_046836543.1	competence type IV pilus assembly protein ComGB	-
PYW31_RS06625	comGC	1350566..1350883 (+)	318	WP_046836542.1	competence type IV pilus major pilin ComGC	Machinery gene
PYW31_RS06630	comGD	1350864..1351307 (+)	444	WP_235602285.1	competence type IV pilus minor pilin ComGD	-
PYW31_RS06635	-	1351294..1351593 (+)	300	WP_046836540.1	hypothetical protein	-
PYW31_RS06640	-	1351628..1352008 (+)	381	WP_082104711.1	ComGF family competence protein	-
PYW31_RS06645	-	1352173..1352688 (+)	516	WP_046836537.1	shikimate kinase	-
PYW31_RS06650	gcvT	1352870..1353961 (+)	1092	WP_046836536.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37206.09 Da
• Isoelectric Point: 8.7346

>NTDB_id=797080 PYW31_RS06615 WP_046836544.1 1348529..1349503(+) (comGA) [Staphylococcus succinus strain DSM 14617]
MKLLFKNVINKAIDREATDVHFIPSEQEVYIKFRIQDNLILQDTIQLELYKKLLTYMKYQAGLDVSNHNTAQSGRYIYKM
KQLFYLRISTLPLSLGNESCVIRIIPQYFQKQSHGSSIKSLYSLMNKKQGLILFSGPTGSGKSTLMYHMVMYAKEQLDLN
IITVEDPVEQLIKGVTQVSINEKAGINYETSFKAILRCDPDVILIGEIRDASIAKYVIQASLSGHLVLSTIHANDCKGAL
LRLREMNISVQEICQSIKSIINQRLVTTLQHNRQLIYEQLNQQDINYFFENNHSLPKDFNKLSYYLNGMSRAGVICEETV
DRYI

Nucleotide

• Length: 975 bp

>NTDB_id=797080 PYW31_RS06615 WP_046836544.1 1348529..1349503(+) (comGA) [Staphylococcus succinus strain DSM 14617]
TTGAAGCTATTGTTTAAAAACGTAATTAATAAAGCAATAGATAGGGAGGCGACAGATGTTCATTTCATTCCTTCTGAGCA
AGAGGTCTATATTAAGTTTAGAATACAAGACAATTTAATATTACAGGACACGATTCAACTAGAACTTTATAAAAAGTTAC
TCACTTATATGAAATATCAAGCTGGATTAGATGTTTCCAATCATAATACAGCACAAAGTGGAAGATACATTTACAAAATG
AAACAATTATTTTACTTAAGAATCTCGACATTACCTTTATCTTTAGGAAATGAAAGCTGTGTAATTAGAATCATCCCTCA
GTATTTTCAAAAGCAAAGTCACGGTAGCAGTATTAAAAGCTTGTATAGTTTAATGAATAAGAAGCAAGGGCTTATTTTAT
TTAGTGGTCCTACTGGATCAGGAAAAAGTACGTTAATGTATCACATGGTAATGTATGCAAAAGAACAATTAGACTTAAAT
ATTATCACGGTTGAAGACCCTGTAGAGCAATTGATCAAAGGTGTGACACAGGTTTCAATAAATGAAAAGGCAGGTATTAA
TTACGAAACTTCTTTTAAAGCGATATTAAGGTGTGATCCAGATGTGATTCTTATTGGTGAGATAAGAGATGCTTCCATAG
CGAAATATGTTATTCAAGCGAGTTTAAGTGGACATTTAGTACTATCAACAATTCATGCTAATGATTGTAAAGGCGCTTTA
TTAAGGTTAAGAGAAATGAATATCAGTGTTCAGGAAATCTGCCAATCTATAAAAAGTATCATTAACCAAAGGCTAGTTAC
CACTTTGCAACATAATAGACAGTTAATATATGAACAGCTAAACCAACAAGATATTAATTATTTTTTTGAAAACAATCACT
CATTACCTAAAGATTTTAATAAGTTATCTTATTATTTAAACGGAATGTCGAGAGCAGGTGTTATTTGTGAAGAAACCGTG
GATCGATATATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	64.198	100	0.642
comGA	Staphylococcus aureus N315	64.198	100	0.642